Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p07190 Brassica napus
Aa31LG9G5060 Aethionema arabicum
Aa31LG9G9530 Aethionema arabicum
Actinidia09459 Actinidia chinensis
Actinidia23767 Actinidia chinensis
AL9U11370 Arabidopsis lyrata
Aqoxy2G03936 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5UHD3M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HN87AT Arachis hypogaea
AT4G13030 Arabidopsis thaliana
ATR0681G155 Amborella trichopoda
Atru.chr6.1445 Acer truncatum
Atru.chr6.1446 Acer truncatum
AUR62001149 Chenopodium quinoa
AUR62016527 Chenopodium quinoa
BcaB04g17726 Brassica carinata
BcaC07g37406 Brassica carinata
BolC8t47729H Brassica oleracea
BraA08t32731Z Brassica rapa
C08p08830 Brassica napus
CARHR218330 Cardamine hirsuta
Carub.0007s2974 Capsella rubella
Ca_07507_v3 Cicer arietinum L.
Cc01_g16530 Coffea canephora
Cfa010403 Carpinus fangiana
Ciclev10020463m.g Citrus clementina
CiPaw.13G050300 Carya illinoinensis
ClCG09G008710 Citrullus lanatus
COL.COLO4_16111 Corchorus olitorius
Cpa.g.sc8.122 Carica papaya
CsaV3_7G026250 Cucumis sativus L.
CSS0035402 Camellia sinensis var. sinensis
DCAR_012676 Daucus carota
Dinv28842 Davidia involucrata
Duzib133G0478 Durio zibethinus
EL10Ac5g11652 Beta vulgaris
EL10Ac5g11653 Beta vulgaris
EL10Ac7g17934 Beta vulgaris
Eucgr.H00756 Eucalyptus grandis
FAN15G3221 Fragaria x ananassa
FAN24G0495 Fragaria x ananassa
FAN27G0238 Fragaria x ananassa
FAN27G0294 Fragaria x ananassa
FvH4_2g18360 Fragaria vesca
FvH4_2g18361 Fragaria vesca
Glyma.18G158800 Glycine max
Gohir.A11G140300 Gossypium hirsutum
Gohir.D11G146600 Gossypium hirsutum
Gorai.007G157000 Gossypium raimondii
GSVIVG01004748001 Vitis vinifera
HanXRQChr07g0193061 Helianthus annuus
HanXRQChr10g0316091 Helianthus annuus
Haze_03352 Corylus avellana
Hma1.2p1_0149F.1_g066540 Hydrangea macrophylla
HPP92_016887 Vanilla planifolia
Hund05587 Selenicereus undatus
Hund18452 Selenicereus undatus
Lalb_Chr03g0041351 Lupinus albus
Lalb_Chr03g0041361 Lupinus albus
Lj1C90G7 Lonicera japonica
Lj1g0007193 Lotus japonicus
Lsat_1_v5_gn_9_17301 Lactuca sativa
Manes.12G049300 Manihot esculenta
Mapoly0051s0107 Marchantia polymorpha
MBI16_g06251_MAGBIO Magnolia biondii
MD05G1169200 Malus domestica
MD10G1157500 Malus domestica
Medtr7g055720 Medicago truncatula
Medtr7g055730 Medicago truncatula
MELO3C021072.2 Cucumis melo
MELO3C030756.2 Cucumis melo
Migut.D02513 Erythranthe guttata
Migut.D02514 Erythranthe guttata
Migut.O00924 Erythranthe guttata
MSTRG.18827 Avicennia marina
Nitab4.5_0003020g0170 Nicotiana tabacum
Nn1g08194 Nelumbo nucifera
Oeu003263.2 Olea europaea
Oeu041603.1 Olea europaea
Os05g0274300 Oryza sativa ssp. japonica
Peaxi162Scf01312g00068 Petunia axillaris
Peaxi162Scf01312g00069 Petunia axillaris
PGR083G0288 Punica granatum
PGSC0003DMG400020172 Solanum tuberosum
Phvul.008G132700 Phaseolus vulgaris
Potri.002G120651 Populus trichocarpa
Potri.002G247400 Populus trichocarpa
Pp3c21_18970 Physcomitrium patens
Prupe.8G196400 Prunus persica
Psat3g149800 Pisum sativum
PSO017G4001 Papaver somniferum
PSO063G4788 Papaver somniferum
QL09p049892 Quercus lobata
RcHm_v2.0_Chr6g0283741 Rosa chinensis
Rhsim01G0251000 Rhododendron simsii
Sabra02G0188300 Salix brachista
Sc17g0001950 Simmondsia chinensis
Sc17g0001960 Simmondsia chinensis
Sc17g0001970 Simmondsia chinensis
Sed0014566 Sechium edule
SEGI_02078 Sequoiadendron giganteum
Solyc06g083220.3 Solanum lycopersicum
Sopen06g034610 Solanum pennellii
Sp7g10140 Schrenkiella parvula
TAR636G0851 Trochodendron aralioides
TAR636G1901 Trochodendron aralioides
THA.LOC104821658 Tarenaya hassleriana
Thecc.01G216600 Theobroma cacao
Thecc.01G216700 Theobroma cacao
TPR.G28325 Trifolium pratense
TPR.G29151 Trifolium pratense
TPR.G31579 Trifolium pratense
TWI18G0571 Tripterygium wilfordii
unitig_37.g12882 Utricularia gibba
vmacro14722 Vaccinium macrocarpon
VMungo1383G3158 Vigna mungo
Zm00001eb261870 Zea mays
Zm00001eb318450 Zea mays
Zm00001eb406270 Zea mays

User provided reference genes

Program Settings