Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p06970 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis
Actinidia22388 Actinidia chinensis
AL4G36810 Arabidopsis lyrata
Aqoxy1G01469 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea
AT2G39440 Arabidopsis thaliana
ATR0763G132 Amborella trichopoda
Atru.chr12.2220 Acer truncatum
AUR62007362 Chenopodium quinoa
AUR62018626 Chenopodium quinoa
BcaB02g09122 Brassica carinata
BcaC02g11618 Brassica carinata
BcaC02g12068 Brassica carinata
BolC4t22432H Brassica oleracea
BraA05t19661Z Brassica rapa
C04p08300 Brassica napus
C04p13120 Brassica napus
CAN.G1222.19 Capsicum annuum
CANSAT21G0613 Cannabis sativa
CARHR087370 Cardamine hirsuta
CARHR134300 Cardamine hirsuta
Carub.0004s2150 Capsella rubella
Ca_21154_v3 Cicer arietinum L.
CBR_g39953 Chara braunii
Cc09_g06280 Coffea canephora
CDE06G2778 Ceratophyllum demersum
Cfa000723 Carpinus fangiana
Cfa003473 Carpinus fangiana
Cfa010446 Carpinus fangiana
Cfa014827 Carpinus fangiana
Ciclev10016972m.g Citrus clementina
CiPaw.10G065100 Carya illinoinensis
ClCG01G009300 Citrullus lanatus
COL.COLO4_30981 Corchorus olitorius
Cpa.g.sc135.32 Carica papaya
Cre08.g378100 Chlamydomonas reinhardtii
CsaV3_1G046580 Cucumis sativus L.
CSS0019703 Camellia sinensis var. sinensis
CSS0027015 Camellia sinensis var. sinensis
DCAR_004323 Daucus carota
Dinv11873 Davidia involucrata
Duzib235G0570 Durio zibethinus
ECA246G4127 Erigeron canadensis
EL10Ac2g02809 Beta vulgaris
Eucgr.D01041 Eucalyptus grandis
FAN16G3293 Fragaria x ananassa
FAN25G1681 Fragaria x ananassa
FvH4_3g12150 Fragaria vesca
Glyma.02G206800 Glycine max
Gohir.A04G017000 Gossypium hirsutum
Gohir.D05G369200 Gossypium hirsutum
Gorai.009G437900 Gossypium raimondii
GSVIVG01012094001 Vitis vinifera
HanXRQChr07g0189661 Helianthus annuus
Haze_06024 Corylus avellana
Haze_06026 Corylus avellana
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla
HPP92_004186 Vanilla planifolia
Hund11169 Selenicereus undatus
Hund11170 Selenicereus undatus
Lalb_Chr02g0152091 Lupinus albus
Lj1A1143T38 Lonicera japonica
Lj4g0008374 Lotus japonicus
Lsat_1_v5_gn_5_36321 Lactuca sativa
Manes.11G104340 Manihot esculenta
Mapoly0007s0049 Marchantia polymorpha
MD05G1254400 Malus domestica
MD10G1234600 Malus domestica
MELO3C021769.2 Cucumis melo
Migut.M01971 Erythranthe guttata
MSTRG.22268 Avicennia marina
Nitab4.5_0002056g0050 Nicotiana tabacum
Nitab4.5_0003773g0080 Nicotiana tabacum
Nn7g38126 Nelumbo nucifera
Oeu052673.2 Olea europaea
Os02g0168900 Oryza sativa ssp. japonica
Peaxi162Scf00149g00921 Petunia axillaris
PGR142G2582 Punica granatum
Phvul.003G153500 Phaseolus vulgaris
Potri.012G120100 Populus trichocarpa
Potri.012G120220 Populus trichocarpa
Potri.015G119201 Populus trichocarpa
Pp3c2_9480 Physcomitrium patens
PRCOL_00005799 Prasinoderma coloniale
Prupe.4G110300 Prunus persica
Psat0s3953g0080 Pisum sativum
PSO541G1844 Papaver somniferum
PSO675G8070 Papaver somniferum
QL11p018076 Quercus lobata
RcHm_v2.0_Chr5g0019891 Rosa chinensis
RhsimUnG0232200 Rhododendron simsii
Sabra15G0136900 Salix brachista
SalBow8G0594 Salvia bowleyana
SalBow8G2736 Salvia bowleyana
Sc05g0005750 Simmondsia chinensis
Sed0026407 Sechium edule
SGA_v2.0_scaffold298G47680 Striga asiatica
SHI31544 Sapria himalayana
SMO367G1186 Selaginella moellendorffii
Solyc02g069070.3 Solanum lycopersicum
Sopen02g018170 Solanum pennellii
Sp4g08180 Schrenkiella parvula
Sp4g21740 Schrenkiella parvula
TAR627G0115 Trochodendron aralioides
THA.LOC104824253 Tarenaya hassleriana
Thecc.06G140200 Theobroma cacao
Thecc.06G141200 Theobroma cacao
Thhalv10017350m.g Eutrema salsugineum
TPR.G24866 Trifolium pratense
TPR.G24917 Trifolium pratense
TWI63G0081 Tripterygium wilfordii
unitig_748.g7497 Utricularia gibba
vmacro03507 Vaccinium macrocarpon
VMungo1215G0360 Vigna mungo
Zm00001eb233030 Zea mays
Zm00001eb233050 Zea mays

User provided reference genes

Program Settings