Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p39640 Brassica napus
Aa31LG8G3180 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1237 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1669 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.537 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2678__2679 Anthoceros agrestis
Actinidia08976 Actinidia chinensis
Actinidia24758 Actinidia chinensis
Ah.01g005340 Amaranthus hybridus
AL3G28660 Arabidopsis lyrata
AL3G29040 Arabidopsis lyrata
AL6G39190 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.8GL56R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SZQK1H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TALZ6N Arachis hypogaea
AT3G16010 Arabidopsis thaliana
ATR0315G083 Amborella trichopoda
ATR0796G148 Amborella trichopoda
ATR0796G323 Amborella trichopoda
Atru.chr1.3269 Acer truncatum
AUR62016443 Chenopodium quinoa
BcaB04g18873 Brassica carinata
BcaC01g03842 Brassica carinata
BolC3t17083H Brassica oleracea
BraA03t13111Z Brassica rapa
C03p48040 Brassica napus
CAN.G572.47 Capsicum annuum
CANSAT54G2088 Cannabis sativa
CARHR091140 Cardamine hirsuta
CARHR158320 Cardamine hirsuta
CARHR158330 Cardamine hirsuta
Carub.0003s1574 Capsella rubella
Cc04_g03450 Coffea canephora
CDE04G2662 Ceratophyllum demersum
Cfa002064 Carpinus fangiana
Ciclev10023415m.g Citrus clementina
CiPaw.02G151100 Carya illinoinensis
ClCG07G013030 Citrullus lanatus
Cpa.g.sc68.20 Carica papaya
CsaV3_3G025150 Cucumis sativus L.
CSS0018907 Camellia sinensis var. sinensis
DCAR_026313 Daucus carota
Dinv30512 Davidia involucrata
Dinv38048 Davidia involucrata
Duzib235G0398 Durio zibethinus
ECA248G2906 Erigeron canadensis
EL10Ac9g21998 Beta vulgaris
Eucgr.J02992 Eucalyptus grandis
FAN02G2386 Fragaria x ananassa
FAN05G1436 Fragaria x ananassa
FAN09G1040 Fragaria x ananassa
FAN14G3575 Fragaria x ananassa
FvH4_6g31160 Fragaria vesca
Glyma.13G359600 Glycine max
Glyma.15G014302 Glycine max
Gohir.A06G188200 Gossypium hirsutum
Gohir.D06G194300 Gossypium hirsutum
Gorai.010G228100 Gossypium raimondii
GSVIVG01017111001 Vitis vinifera
HanXRQChr09g0275241 Helianthus annuus
Haze_16431 Corylus avellana
HPP92_021740 Vanilla planifolia
Hund00615 Selenicereus undatus
Lalb_Chr22g0351261 Lupinus albus
Lj3g0002516 Lotus japonicus
Lj5C60T11 Lonicera japonica
Lsat_1_v5_gn_4_103720 Lactuca sativa
Manes.04G123300 Manihot esculenta
MBI04_g22013_MAGBIO Magnolia biondii
MD17G1195500 Malus domestica
Medtr2g102210 Medicago truncatula
MELO3C012957.2 Cucumis melo
Migut.I00863 Erythranthe guttata
MSTRG.11079 Avicennia marina
Nitab4.5_0002438g0020 Nicotiana tabacum
Nitab4.5_0008982g0020 Nicotiana tabacum
Nn3g16958 Nelumbo nucifera
Oeu025379.3 Olea europaea
Os02g0266200 Oryza sativa ssp. japonica
Peaxi162Scf00034g00085 Petunia axillaris
PGR102G0966 Punica granatum
PGSC0003DMG400031380 Solanum tuberosum
Phvul.005G171500 Phaseolus vulgaris
Potri.001G180000 Populus trichocarpa
Pp3c1_6490 Physcomitrium patens
Prupe.3G071400 Prunus persica
Psat5g299040 Pisum sativum
PSO229G0046 Papaver somniferum
PSO675G3775 Papaver somniferum
QL05p024247 Quercus lobata
RcHm_v2.0_Chr2g0137841 Rosa chinensis
Rhsim12G0197800 Rhododendron simsii
Sabra01G0146900 Salix brachista
SalBow2G3072 Salvia bowleyana
Sc10g0007430 Simmondsia chinensis
Sed0027244 Sechium edule
SEGI_07085 Sequoiadendron giganteum
SEGI_28689 Sequoiadendron giganteum
SEGI_32921 Sequoiadendron giganteum
SEGI_33426 Sequoiadendron giganteum
SEGI_33441 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02592 Striga asiatica
SHI10915 Sapria himalayana
SMO139G0022 Selaginella moellendorffii
Solyc12g043100.2 Solanum lycopersicum
Sopen12g022350 Solanum pennellii
Sp3g14360 Schrenkiella parvula
TAR626G0678 Trochodendron aralioides
THA.LOC104817996 Tarenaya hassleriana
Thecc.06G087000 Theobroma cacao
Thhalv10020273m.g Eutrema salsugineum
TPR.G37281 Trifolium pratense
TWI75G1451 Tripterygium wilfordii
unitig_27.g25088 Utricularia gibba
vmacro16952 Vaccinium macrocarpon
VMungo1080G0367 Vigna mungo
Zm00001eb054940 Zea mays
Zm00001eb279950 Zea mays
Zm00001eb378780 Zea mays

User provided reference genes

Program Settings