Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p10280 Brassica napus
Aa31LG1G750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis
Actinidia19872 Actinidia chinensis
Actinidia28328 Actinidia chinensis
Actinidia31893 Actinidia chinensis
AL1G26180 Arabidopsis lyrata
Aqoxy3G00673 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea
AT1G14300 Arabidopsis thaliana
ATR0564G062 Amborella trichopoda
Atru.chr11.1802 Acer truncatum
AUR62000824 Chenopodium quinoa
AUR62005766 Chenopodium quinoa
AUR62028791 Chenopodium quinoa
BcaC05g25323 Brassica carinata
BcaNung06708 Brassica carinata
BolC5t29959H Brassica oleracea
BraA06t24210Z Brassica rapa
C05p12050 Brassica napus
CAN.G58.36 Capsicum annuum
CANSAT80G2808 Cannabis sativa
CARHR014720 Cardamine hirsuta
Carub.0001s1398 Capsella rubella
Ca_24218_v3 Cicer arietinum L.
CBR_g41270 Chara braunii
Cc11_g13110 Coffea canephora
CDE02G3655 Ceratophyllum demersum
CiPaw.06G083800 Carya illinoinensis
ClCG09G009490 Citrullus lanatus
COL.COLO4_22995 Corchorus olitorius
Cpa.g.sc128.13 Carica papaya
Cre10.g437100 Chlamydomonas reinhardtii
CsaV3_7G025360 Cucumis sativus L.
CSS0008818 Camellia sinensis var. sinensis
DCAR_007148 Daucus carota
DCAR_010724 Daucus carota
Dinv16636 Davidia involucrata
Duzib268G1478 Durio zibethinus
ECA233G3761 Erigeron canadensis
EL10Ac6g13192 Beta vulgaris
FAN12G0030 Fragaria x ananassa
FAN22G1517 Fragaria x ananassa
FvH4_4g31470 Fragaria vesca
Glyma.08G300451 Glycine max
Glyma.18G120051 Glycine max
Gohir.A12G165400 Gossypium hirsutum
Gohir.D12G168500 Gossypium hirsutum
GSVIVG01020003001 Vitis vinifera
HanXRQChr12g0362551 Helianthus annuus
Haze_12021 Corylus avellana
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla
HPP92_011352 Vanilla planifolia
Hund05886 Selenicereus undatus
Lalb_Chr16g0385831 Lupinus albus
Lj3C1038T21 Lonicera japonica
Lj4g0006351 Lotus japonicus
Lsat_1_v5_gn_7_2081 Lactuca sativa
Lsat_1_v5_gn_8_52820 Lactuca sativa
Manes.01G186600 Manihot esculenta
Mapoly0146s0011 Marchantia polymorpha
MBI02_g23683_MAGBIO Magnolia biondii
MD16G1074200 Malus domestica
Medtr8g055880 Medicago truncatula
MELO3C024128.2 Cucumis melo
Migut.E00098 Erythranthe guttata
Migut.E00100 Erythranthe guttata
MSTRG.13418 Avicennia marina
Nitab4.5_0000703g0080 Nicotiana tabacum
Nitab4.5_0012364g0010 Nicotiana tabacum
Nn1g08820 Nelumbo nucifera
Nn3g17215 Nelumbo nucifera
Nn4g22981 Nelumbo nucifera
Oeu045402.1 Olea europaea
Oeu045403.1 Olea europaea
Os10g0406800 Oryza sativa ssp. japonica
Peaxi162Scf00541g00528 Petunia axillaris
Peaxi162Scf00541g00531 Petunia axillaris
PGR119G0901 Punica granatum
PGSC0003DMG400003385 Solanum tuberosum
Phvul.003G049600 Phaseolus vulgaris
Potri.013G124050 Populus trichocarpa
Potri.019G092000 Populus trichocarpa
Pp3c6_14800 Physcomitrium patens
PRCOL_00003635 Prasinoderma coloniale
Psat4g134120 Pisum sativum
PSO478G0657 Papaver somniferum
QL03p064376 Quercus lobata
QL03p064380 Quercus lobata
RcHm_v2.0_Chr4g0439961 Rosa chinensis
RcHm_v2.0_Chr5g0047461 Rosa chinensis
RcHm_v2.0_Chr7g0231891 Rosa chinensis
Rhsim12G0063200 Rhododendron simsii
Sabra13G0103000 Salix brachista
Sabra19G0105400 Salix brachista
SalBow8G2540 Salvia bowleyana
Sc14g0008270 Simmondsia chinensis
Sed0013774 Sechium edule
SEGI_09156 Sequoiadendron giganteum
SEGI_31629 Sequoiadendron giganteum
SGA_v2.0_scaffold389G50576 Striga asiatica
SMO307G0042 Selaginella moellendorffii
Solyc05g007440.3 Solanum lycopersicum
Sopen05g003320 Solanum pennellii
Sp1g12650 Schrenkiella parvula
TAR622G0326 Trochodendron aralioides
THA.LOC104805154 Tarenaya hassleriana
Thecc.02G350900 Theobroma cacao
TPR.G31812 Trifolium pratense
TWI12G0418 Tripterygium wilfordii
unitig_22.g5546 Utricularia gibba
vmacro01252 Vaccinium macrocarpon
VMungo0251G3125 Vigna mungo
Zm00001eb223220 Zea mays

User provided reference genes

Program Settings