Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p38090 Brassica napus
A10p13210 Brassica napus
Aa31LG3G11890 Aethionema arabicum
Aa31LG8G450 Aethionema arabicum
Ah.06g181490 Amaranthus hybridus
AL3G25020 Arabidopsis lyrata
AL8G31560 Arabidopsis lyrata
Aqoxy4G01886 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FR49Y0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4RFEM Arachis hypogaea
AT3G13227 Arabidopsis thaliana
AT5G55980 Arabidopsis thaliana
ATR0751G116 Amborella trichopoda
Atru.chr2.3834 Acer truncatum
BcaB01g04378 Brassica carinata
BcaB04g18747 Brassica carinata
BcaB06g25478 Brassica carinata
BcaB08g35964 Brassica carinata
BcaC01g04005 Brassica carinata
BcaC01g06401 Brassica carinata
BcaC04g20175 Brassica carinata
BcaC05g29199 Brassica carinata
BolC3t16893H Brassica oleracea
BolC5t34141H Brassica oleracea
BolC9t57545H Brassica oleracea
BraA03t12962Z Brassica rapa
BraA10t43419Z Brassica rapa
C03p46220 Brassica napus
C09p46970 Brassica napus
CARHR087850 Cardamine hirsuta
CARHR269350 Cardamine hirsuta
Carub.0003s1260 Capsella rubella
Carub.0008s1632 Capsella rubella
Cfa021889 Carpinus fangiana
Ciclev10010675m.g Citrus clementina
CiPaw.11G206800 Carya illinoinensis
ClCG09G021530 Citrullus lanatus
ClCG10G003900 Citrullus lanatus
ClCG10G004060 Citrullus lanatus
ClCG10G004500 Citrullus lanatus
COL.COLO4_07740 Corchorus olitorius
Cpa.g.sc12.109 Carica papaya
CsaV3_3G003890 Cucumis sativus L.
CsaV3_7G023850 Cucumis sativus L.
CSS0010283 Camellia sinensis var. sinensis
CSS0024852 Camellia sinensis var. sinensis
CSS0048788 Camellia sinensis var. sinensis
DCAR_008749 Daucus carota
Duzib170G0862 Durio zibethinus
Duzib268G0079 Durio zibethinus
ECA234G2793 Erigeron canadensis
ECA236G2479 Erigeron canadensis
EL10Ac4g07540 Beta vulgaris
Eucgr.F02027 Eucalyptus grandis
FAN11G0661 Fragaria x ananassa
FAN21G1732 Fragaria x ananassa
FAN25G3397 Fragaria x ananassa
FvH4_3g42280 Fragaria vesca
Glyma.08G332400 Glycine max
Glyma.14G011700 Glycine max
Glyma.18G074500 Glycine max
Gohir.A01G093700 Gossypium hirsutum
Gohir.A13G130900 Gossypium hirsutum
Gohir.D01G078200 Gossypium hirsutum
Gohir.D13G134200 Gossypium hirsutum
Gorai.002G102800 Gossypium raimondii
Gorai.013G150500 Gossypium raimondii
GSVIVG01014741001 Vitis vinifera
Hma1.2p1_0599F.1_g186970 Hydrangea macrophylla
Lalb_Chr15g0082301 Lupinus albus
Lalb_Chr20g0114121 Lupinus albus
Lj6g0005510 Lotus japonicus
LjContig00081g0022969 Lotus japonicus
Lsat_1_v5_gn_5_122340 Lactuca sativa
Manes.01G003400 Manihot esculenta
Manes.05G200400 Manihot esculenta
MBI14_g39127_MAGBIO Magnolia biondii
MD03G1035000 Malus domestica
Medtr3g461010 Medicago truncatula
MELO3C014070.2 Cucumis melo
MELO3C024968.2 Cucumis melo
Migut.H01277 Erythranthe guttata
Migut.M00067 Erythranthe guttata
Nitab4.5_0001229g0080 Nicotiana tabacum
Oeu019702.1 Olea europaea
Oeu036994.1 Olea europaea
Peaxi162Scf00047g02119 Petunia axillaris
Peaxi162Scf01164g00020 Petunia axillaris
PGR083G0815 Punica granatum
Phvul.006G059230 Phaseolus vulgaris
Phvul.008G281200 Phaseolus vulgaris
Potri.001G371400 Populus trichocarpa
Prupe.6G028200 Prunus persica
Psat5g166560 Pisum sativum
QL08p003109 Quercus lobata
QL08p003180 Quercus lobata
RcHm_v2.0_Chr5g0075611 Rosa chinensis
Rhsim06G0178800 Rhododendron simsii
Sabra11G0088600 Salix brachista
Sabra16G0244100 Salix brachista
Sc03g0011540 Simmondsia chinensis
Sed0014616 Sechium edule
Sed0023265 Sechium edule
SGA_v2.0_scaffold49G18393 Striga asiatica
Solyc07g045200.1 Solanum lycopersicum
Solyc12g006220.3 Solanum lycopersicum
Sopen07g023750 Solanum pennellii
Sopen12g002170 Solanum pennellii
Sp3g11420 Schrenkiella parvula
Sp6g17830 Schrenkiella parvula
TAR624G0983 Trochodendron aralioides
THA.LOC104822717 Tarenaya hassleriana
Thecc.07G008000 Theobroma cacao
Thhalv10015819m.g Eutrema salsugineum
Thhalv10021795m.g Eutrema salsugineum
TPR.G17947 Trifolium pratense
TWI38G1827 Tripterygium wilfordii
TWI39G1297 Tripterygium wilfordii
VMungo0540G0896 Vigna mungo

User provided reference genes

Program Settings