Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16170 Brassica napus
Aa31LG1G25250 Aethionema arabicum
Actinidia26680 Actinidia chinensis
Actinidia27097 Actinidia chinensis
Ah.10g027080 Amaranthus hybridus
Ah.10g027090 Amaranthus hybridus
AL7G49300 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea
AT5G40520 Arabidopsis thaliana
ATR0743G243 Amborella trichopoda
Atru.chr4.1340 Acer truncatum
AUR62005936 Chenopodium quinoa
AUR62028127 Chenopodium quinoa
BcaB02g08030 Brassica carinata
BcaC07g39321 Brassica carinata
BcaC08g44345 Brassica carinata
BolC6t36977H Brassica oleracea
BraA05t20528Z Brassica rapa
C06p17830 Brassica napus
CANSAT56G2182 Cannabis sativa
CARHR138600 Cardamine hirsuta
Carub.0007s3500 Capsella rubella
Ca_03751_v3 Cicer arietinum L.
Ca_07546_v3 Cicer arietinum L.
Cc03_g12540 Coffea canephora
CDE07G0581 Ceratophyllum demersum
Cfa015217 Carpinus fangiana
Ciclev10019155m.g Citrus clementina
CiPaw.01G173600 Carya illinoinensis
ClCG09G018880 Citrullus lanatus
COL.COLO4_28380 Corchorus olitorius
Cpa.g.sc9.329 Carica papaya
CsaV3_7G002050 Cucumis sativus L.
CSS0007333 Camellia sinensis var. sinensis
CSS0011413 Camellia sinensis var. sinensis
DCAR_027052 Daucus carota
Dinv05091 Davidia involucrata
Dinv05092 Davidia involucrata
Duzib151G0982 Durio zibethinus
EL10Ac9g22987 Beta vulgaris
Eucgr.A00038 Eucalyptus grandis
FAN19G2476 Fragaria x ananassa
FAN23G1889 Fragaria x ananassa
FAN26G1825 Fragaria x ananassa
FAN28G2072 Fragaria x ananassa
FAN28G2984 Fragaria x ananassa
FvH4_1g27220 Fragaria vesca
Glyma.12G050000 Glycine max
Gohir.A02G010500 Gossypium hirsutum
Gohir.A02G010550 Gossypium hirsutum
Gohir.D02G011000 Gossypium hirsutum
Gorai.005G013400 Gossypium raimondii
GSVIVG01038091001 Vitis vinifera
HanXRQChr12g0385971 Helianthus annuus
HanXRQChr12g0385981 Helianthus annuus
HanXRQChr17g0565921 Helianthus annuus
Haze_01419 Corylus avellana
Haze_21456 Corylus avellana
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla
Hund25530 Selenicereus undatus
Lalb_Chr03g0025971 Lupinus albus
Lalb_Chr03g0026031 Lupinus albus
Lj3A110T20 Lonicera japonica
Lj3g0015132 Lotus japonicus
Lsat_1_v5_gn_5_69460 Lactuca sativa
Manes.04G048400 Manihot esculenta
MBI11_g10487_MAGBIO Magnolia biondii
MD04G1046800 Malus domestica
Medtr4g068005 Medicago truncatula
MELO3C015702.2 Cucumis melo
MSTRG.27276 Avicennia marina
Nitab4.5_0000946g0050 Nicotiana tabacum
Nitab4.5_0001210g0010 Nicotiana tabacum
Nitab4.5_0001586g0210 Nicotiana tabacum
Nitab4.5_0002782g0010 Nicotiana tabacum
Nn1g09713 Nelumbo nucifera
Oeu002416.1 Olea europaea
Oeu029987.1 Olea europaea
Os09g0103200 Oryza sativa ssp. japonica
Peaxi162Scf00180g00519 Petunia axillaris
PGR102G2296 Punica granatum
PGSC0003DMG400026917 Solanum tuberosum
Phvul.011G201600 Phaseolus vulgaris
Potri.017G018300 Populus trichocarpa
Prupe.8G045700 Prunus persica
Psat7g208760 Pisum sativum
PSO017G5839 Papaver somniferum
PSO063G4508 Papaver somniferum
PSO473G0001 Papaver somniferum
QL10p052118 Quercus lobata
RcHm_v2.0_Chr3g0487611 Rosa chinensis
Sabra06G0076300 Salix brachista
Sabra17G0012500 Salix brachista
Sc19g0000330 Simmondsia chinensis
Sed0020880 Sechium edule
SEGI_29361 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28623 Striga asiatica
SHI01154 Sapria himalayana
Solyc06g073160.4 Solanum lycopersicum
Sopen06g029510 Solanum pennellii
Sp7g05120 Schrenkiella parvula
TAR633G0487 Trochodendron aralioides
TAR633G1963 Trochodendron aralioides
TAR633G2319 Trochodendron aralioides
TAR633G2818 Trochodendron aralioides
THA.LOC104805724 Tarenaya hassleriana
Thecc.04G171700 Theobroma cacao
Thhalv10027675m.g Eutrema salsugineum
TPR.G34183 Trifolium pratense
TWI15G0430 Tripterygium wilfordii
unitig_26.g9736 Utricularia gibba
vmacro00655 Vaccinium macrocarpon
vmacro18728 Vaccinium macrocarpon
vmacro21172 Vaccinium macrocarpon
VMungo0647G1321 Vigna mungo
VMungo0720G0522 Vigna mungo
Zm00001eb184290 Zea mays

User provided reference genes

Program Settings