Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p34140 Brassica napus
Aa31LG4G12010 Aethionema arabicum
Actinidia08088 Actinidia chinensis
Actinidia30676 Actinidia chinensis
AL2G26280 Arabidopsis lyrata
Aqoxy5G03514 Aquilegia oxysepala
Aqoxy5G03519 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea
AT1G67620 Arabidopsis thaliana
ATR0609G130 Amborella trichopoda
Atru.chr11.2245 Acer truncatum
Atru.chr11.2260 Acer truncatum
Atru.chr7.1050 Acer truncatum
AUR62005570 Chenopodium quinoa
AUR62024160 Chenopodium quinoa
BcaB03g15182 Brassica carinata
BcaC08g46171 Brassica carinata
BolC6t39176H Brassica oleracea
BraA07t31040Z Brassica rapa
BraA07t31044Z Brassica rapa
C06p42630 Brassica napus
CAN.G1081.11 Capsicum annuum
CAN.G1081.12 Capsicum annuum
CAN.G3094.1 Capsicum annuum
CAN.G3094.2 Capsicum annuum
CANSAT56G1091 Cannabis sativa
CARHR060190 Cardamine hirsuta
Carub.0002s1395 Capsella rubella
Ca_16483_v3 Cicer arietinum L.
CBR_g17596 Chara braunii
Cc11_g16590 Coffea canephora
CDE02G2623 Ceratophyllum demersum
CDE09G0294 Ceratophyllum demersum
Cfa009314 Carpinus fangiana
Ciclev10032688m.g Citrus clementina
CiPaw.05G115200 Carya illinoinensis
ClCG08G017310 Citrullus lanatus
COL.COLO4_23620 Corchorus olitorius
Cpa.g.sc351.2 Carica papaya
CsaV3_2G025320 Cucumis sativus L.
CSS0023056 Camellia sinensis var. sinensis
DCAR_007015 Daucus carota
Dinv14799 Davidia involucrata
Duzib248G0208 Durio zibethinus
ECA234G0356 Erigeron canadensis
EL10Ac6g13437 Beta vulgaris
Eucgr.B03461 Eucalyptus grandis
FAN12G1259 Fragaria x ananassa
FAN22G0294 Fragaria x ananassa
FvH4_4g24330 Fragaria vesca
Glyma.11G248100 Glycine max
Glyma.18G009100 Glycine max
Gohir.A03G128700 Gossypium hirsutum
Gohir.D02G152500 Gossypium hirsutum
Gorai.005G171500 Gossypium raimondii
GSVIVG01010346001 Vitis vinifera
HanXRQChr17g0569291 Helianthus annuus
Haze_12368 Corylus avellana
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla
HPP92_021374 Vanilla planifolia
Hund06064 Selenicereus undatus
Lalb_Chr11g0075681 Lupinus albus
Lj3A1064T102 Lonicera japonica
Lj3g0011418 Lotus japonicus
Lsat_1_v5_gn_4_2821 Lactuca sativa
Manes.13G015700 Manihot esculenta
MBI08_g41741_MAGBIO Magnolia biondii
MBI08_g41742_MAGBIO Magnolia biondii
MCO03G004 Micromonas commoda
MD13G1112100 Malus domestica
MD16G1111700 Malus domestica
Medtr3g085720 Medicago truncatula
MELO3C010728.2 Cucumis melo
Migut.K00702 Erythranthe guttata
Nitab4.5_0000240g0060 Nicotiana tabacum
Nitab4.5_0000581g0080 Nicotiana tabacum
Nn4g22406 Nelumbo nucifera
Oeu041686.1 Olea europaea
Os12g0241100 Oryza sativa ssp. japonica
Peaxi162Scf00128g00835 Petunia axillaris
PGR102G0799 Punica granatum
Phvul.001G259500 Phaseolus vulgaris
Potri.008G105700 Populus trichocarpa
Pp3c8_14070 Physcomitrium patens
PRCOL_00005691 Prasinoderma coloniale
Prupe.1G233300 Prunus persica
Psat5g094640 Pisum sativum
PSO063G2169 Papaver somniferum
PSO782G3390 Papaver somniferum
QL03p054759 Quercus lobata
RcHm_v2.0_Chr1g0343341 Rosa chinensis
RcHm_v2.0_Chr1g0366581 Rosa chinensis
RcHm_v2.0_Chr3g0456071 Rosa chinensis
RcHm_v2.0_Chr4g0431131 Rosa chinensis
RcHm_v2.0_Chr7g0183971 Rosa chinensis
RcHm_v2.0_Chr7g0198741 Rosa chinensis
Rhsim12G0035000 Rhododendron simsii
Sabra08G0079700 Salix brachista
SalBow2G1482 Salvia bowleyana
SalBow3G4645 Salvia bowleyana
Sc04g0004650 Simmondsia chinensis
Sed0015494 Sechium edule
SGA_v2.0_scaffold46G17392 Striga asiatica
SMO141G0262 Selaginella moellendorffii
Solyc05g014650.2 Solanum lycopersicum
Sopen05g009780 Solanum pennellii
SpUn0282_0010 Schrenkiella parvula
TAR374G1568 Trochodendron aralioides
THA.LOC104825521 Tarenaya hassleriana
Thecc.02G274200 Theobroma cacao
Thhalv10019173m.g Eutrema salsugineum
TPR.G22435 Trifolium pratense
TWI18G0344 Tripterygium wilfordii
unitig_749.g13304 Utricularia gibba
vmacro01086 Vaccinium macrocarpon
VMungo1383G0611 Vigna mungo
Zm00001eb133570 Zea mays

User provided reference genes

Program Settings