Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p19570 Brassica napus
A03p57860 Brassica napus
A09p58680 Brassica napus
Aa31LG8G17780 Aethionema arabicum
Actinidia01434 Actinidia chinensis
Actinidia09877 Actinidia chinensis
Actinidia11069 Actinidia chinensis
Actinidia11070 Actinidia chinensis
AL3G54120 Arabidopsis lyrata
AL7G24440 Arabidopsis lyrata
AT2G20870 Arabidopsis thaliana
AT4G28160 Arabidopsis thaliana
Atru.chr6.3036 Acer truncatum
BcaB08g34945 Brassica carinata
BcaC06g32641 Brassica carinata
BcaC07g41191 Brassica carinata
BcaC09g50509 Brassica carinata
BcaNung01592 Brassica carinata
BolC1t02409H Brassica oleracea
BolC7t46077H Brassica oleracea
BolC8t51760H Brassica oleracea
BraA01t01892Z Brassica rapa
BraA03t14850Z Brassica rapa
BraA09t41254Z Brassica rapa
C07p56000 Brassica napus
C08p41970 Brassica napus
CANSAT64G0061 Cannabis sativa
CARHR111610 Cardamine hirsuta
CARHR235870 Cardamine hirsuta
Carub.0003s3553 Capsella rubella
Carub.0007s1261 Capsella rubella
Ca_01515_v3 Cicer arietinum L.
Ca_05301_v3 Cicer arietinum L.
Cc05_g06730 Coffea canephora
Ciclev10017219m.g Citrus clementina
ClCG02G017440 Citrullus lanatus
COL.COLO4_35406 Corchorus olitorius
Cpa.g.sc34.125 Carica papaya
CSS0017413 Camellia sinensis var. sinensis
CSS0029289 Camellia sinensis var. sinensis
CSS0036536 Camellia sinensis var. sinensis
DCAR_006245 Daucus carota
DCAR_006246 Daucus carota
DCAR_023670 Daucus carota
Duzib052G0119 Durio zibethinus
Duzib052G0455 Durio zibethinus
Duzib132G0356 Durio zibethinus
ECA246G2923 Erigeron canadensis
Eucgr.A01793 Eucalyptus grandis
FAN02G2988 Fragaria x ananassa
FAN14G5843 Fragaria x ananassa
Glyma.06G296300 Glycine max
Glyma.13G299400 Glycine max
Gohir.A03G158500 Gossypium hirsutum
Gohir.A12G137200 Gossypium hirsutum
Gohir.A12G137250 Gossypium hirsutum
Gohir.D01G197650 Gossypium hirsutum
Gohir.D02G181700 Gossypium hirsutum
Gohir.D06G117266 Gossypium hirsutum
Gohir.D12G141100 Gossypium hirsutum
Gohir.D12G141200 Gossypium hirsutum
Gorai.005G204200 Gossypium raimondii
Gorai.008G152500 Gossypium raimondii
HanXRQChr10g0289571 Helianthus annuus
HanXRQChr17g0559971 Helianthus annuus
Hma1.2p1_0875F.1_g231430 Hydrangea macrophylla
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla
Lalb_Chr14g0366741 Lupinus albus
Lalb_Chr19g0135361 Lupinus albus
Lj3g0001103 Lotus japonicus
Lj3g0012520 Lotus japonicus
Lsat_1_v5_gn_3_39421 Lactuca sativa
Lsat_1_v5_gn_4_70120 Lactuca sativa
Manes.13G149300 Manihot esculenta
MBI02_g19252_MAGBIO Magnolia biondii
MD17G1079900 Malus domestica
Medtr2g090185 Medicago truncatula
Medtr4g037480 Medicago truncatula
Medtr4g037560 Medicago truncatula
MELO3C013561.2 Cucumis melo
Migut.H01051 Erythranthe guttata
Migut.H01052 Erythranthe guttata
Migut.H01053 Erythranthe guttata
MSTRG.14198 Avicennia marina
Nitab4.5_0005380g0010 Nicotiana tabacum
Oeu029925.1 Olea europaea
Oeu029927.1 Olea europaea
Peaxi162Scf00132g00074 Petunia axillaris
PGR042G1420 Punica granatum
PGSC0003DMG400018315 Solanum tuberosum
Phvul.005G106200 Phaseolus vulgaris
Phvul.011G113200 Phaseolus vulgaris
Potri.013G144200 Populus trichocarpa
Prupe.3G234900 Prunus persica
Psat0s3526g0040 Pisum sativum
Psat5g270720 Pisum sativum
QL08p037794 Quercus lobata
RcHm_v2.0_Chr2g0162351 Rosa chinensis
Rhsim04G0066600 Rhododendron simsii
Rhsim06G0148700 Rhododendron simsii
Rhsim06G0148800 Rhododendron simsii
Sabra13G0116200 Salix brachista
SalBow1G4058 Salvia bowleyana
Sc12g0002810 Simmondsia chinensis
SGA_v2.0_scaffold356G49791 Striga asiatica
Solyc07g054310.3 Solanum lycopersicum
Sopen07g028260 Solanum pennellii
Sp3g34120 Schrenkiella parvula
Sp7g26110 Schrenkiella parvula
TAR141G0004 Trochodendron aralioides
THA.LOC104824711 Tarenaya hassleriana
Thecc.02G175500 Theobroma cacao
Thhalv10002109m.g Eutrema salsugineum
Thhalv10027152m.g Eutrema salsugineum
TPR.G21773 Trifolium pratense
TPR.G35552 Trifolium pratense
TWI36G1477 Tripterygium wilfordii
TWI75G0677 Tripterygium wilfordii
unitig_749.g13953 Utricularia gibba
VMungo1080G0484 Vigna mungo

User provided reference genes

Program Settings