Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p45120 Brassica napus
A05p09770 Brassica napus
A07p07050 Brassica napus
A09p05680 Brassica napus
A09p24350 Brassica napus
Aa31LG8G12480 Aethionema arabicum
Actinidia34741 Actinidia chinensis
Actinidia38949 Actinidia chinensis
Ah.04g163750 Amaranthus hybridus
AL3G45710 Arabidopsis lyrata
Aqoxy2G03596 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea
AT2G14045 Arabidopsis thaliana
ATR0665G282 Amborella trichopoda
Atru.chr2.886 Acer truncatum
AUR62001066 Chenopodium quinoa
AUR62004887 Chenopodium quinoa
BcaB04g18782 Brassica carinata
BcaC01g03109 Brassica carinata
BolC3t17881H Brassica oleracea
BolC7t41661H Brassica oleracea
BraA03t13647Z Brassica rapa
BraA06t26268Z Brassica rapa
BraA09t38027Z Brassica rapa
BraA10t43135Z Brassica rapa
C03p55970 Brassica napus
C07p11900 Brassica napus
CAN.G186.72 Capsicum annuum
CANSAT54G3036 Cannabis sativa
CARHR104660 Cardamine hirsuta
Carub.0003s2825 Capsella rubella
Ca_09468_v3 Cicer arietinum L.
CBR_g51472 Chara braunii
Cc02_g09090 Coffea canephora
CDE06G1546 Ceratophyllum demersum
Cfa006323 Carpinus fangiana
Ciclev10022930m.g Citrus clementina
CiPaw.07G077700 Carya illinoinensis
ClCG02G016980 Citrullus lanatus
COL.COLO4_15417 Corchorus olitorius
Cpa.g.sc162.11 Carica papaya
Cre02.g105950 Chlamydomonas reinhardtii
CsaV3_2G003760 Cucumis sativus L.
CSS0047325 Camellia sinensis var. sinensis
DCAR_030976 Daucus carota
Dinv14631 Davidia involucrata
Dinv18276 Davidia involucrata
Duzib128G0372 Durio zibethinus
ECA238G3797 Erigeron canadensis
EL10Ac4g09049 Beta vulgaris
Eucgr.B02129 Eucalyptus grandis
FAN02G4370 Fragaria x ananassa
FAN05G5208 Fragaria x ananassa
FAN09G4219 Fragaria x ananassa
FvH4_6g02371 Fragaria vesca
Glyma.03G251900 Glycine max
Gohir.A13G168900 Gossypium hirsutum
Gohir.D12G180151 Gossypium hirsutum
Gohir.D13G174300 Gossypium hirsutum
Gorai.008G193300 Gossypium raimondii
Gorai.013G186500 Gossypium raimondii
GSVIVG01014622001 Vitis vinifera
GSVIVG01015127001 Vitis vinifera
GSVIVG01036217001 Vitis vinifera
HanXRQChr11g0322821 Helianthus annuus
Haze_04466 Corylus avellana
HPP92_000759 Vanilla planifolia
Hund06940 Selenicereus undatus
Lalb_Chr04g0262001 Lupinus albus
Lj1g0023872 Lotus japonicus
Lsat_1_v5_gn_2_107641 Lactuca sativa
Manes.09G149900 Manihot esculenta
Mapoly0013s0055 Marchantia polymorpha
MBI19_g37090_MAGBIO Magnolia biondii
MCO10G233 Micromonas commoda
MD12G1244800 Malus domestica
Medtr7g116300 Medicago truncatula
MELO3C004419.2 Cucumis melo
Migut.F00814 Erythranthe guttata
MSTRG.9005 Avicennia marina
Nitab4.5_0000930g0080 Nicotiana tabacum
Nitab4.5_0002651g0060 Nicotiana tabacum
Nn1g02669 Nelumbo nucifera
Oeu058331.1 Olea europaea
Os07g0185800 Oryza sativa ssp. japonica
Peaxi162Scf00135g00914 Petunia axillaris
PGR142G1199 Punica granatum
PGSC0003DMG400025428 Solanum tuberosum
Phvul.006G106600 Phaseolus vulgaris
Potri.019G014100 Populus trichocarpa
Pp3c7_11510 Physcomitrium patens
PRCOL_00003504 Prasinoderma coloniale
Prupe.6G347400 Prunus persica
Psat3g006080 Pisum sativum
PSO210G7245 Papaver somniferum
PSO832G0589 Papaver somniferum
QL01p041965 Quercus lobata
QL03p032184 Quercus lobata
QL03p032281 Quercus lobata
RcHm_v2.0_Chr3g0450141 Rosa chinensis
Rhsim09G0138600 Rhododendron simsii
Rhsim10G0042300 Rhododendron simsii
Sabra19G0016300 Salix brachista
Sabra19G0026800 Salix brachista
Sc15g0002500 Simmondsia chinensis
Sed0018278 Sechium edule
SGA_v2.0_scaffold90G27702 Striga asiatica
SHI31376 Sapria himalayana
Sopen04g004980 Solanum pennellii
Sp3g27300 Schrenkiella parvula
TAR365G0041 Trochodendron aralioides
THA.LOC104808031 Tarenaya hassleriana
Thecc.05G276800 Theobroma cacao
Thhalv10023143m.g Eutrema salsugineum
TPR.G6950 Trifolium pratense
TWI56G0396 Tripterygium wilfordii
vmacro10349 Vaccinium macrocarpon
Zm00001eb112450 Zea mays
Zm00001eb301780 Zea mays

User provided reference genes

Program Settings