Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p11980 Brassica napus
Aa31LG10G6320 Aethionema arabicum
Actinidia01465 Actinidia chinensis
Actinidia40259 Actinidia chinensis
Ah.04g153870 Amaranthus hybridus
Ah.13g074890 Amaranthus hybridus
AL7G39510 Arabidopsis lyrata
Aqoxy2G01198 Aquilegia oxysepala
Aqoxy5G00712 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XR1IK3 Arachis hypogaea
AT4G15790 Arabidopsis thaliana
ATR0706G169 Amborella trichopoda
Atru.chr4.2828 Acer truncatum
AUR62040366 Chenopodium quinoa
AUR62041205 Chenopodium quinoa
BcaC07g37932 Brassica carinata
BolC8t48317H Brassica oleracea
BraA08t33189Z Brassica rapa
CAN.G129.20 Capsicum annuum
CANSAT78G1100 Cannabis sativa
CARHR290290 Cardamine hirsuta
Carub.0007s2587 Capsella rubella
Ca_01942_v3 Cicer arietinum L.
Cc03_g02020 Coffea canephora
CDE05G3651 Ceratophyllum demersum
Cfa015380 Carpinus fangiana
Ciclev10006148m.g Citrus clementina
CiPaw.01G149100 Carya illinoinensis
CiPaw.02G083300 Carya illinoinensis
ClCG05G006040 Citrullus lanatus
COL.COLO4_13881 Corchorus olitorius
Cpa.g.sc16.165 Carica papaya
CsaV3_3G014580 Cucumis sativus L.
CSS0008404 Camellia sinensis var. sinensis
CSS0019267 Camellia sinensis var. sinensis
DCAR_030531 Daucus carota
Dinv44385 Davidia involucrata
Duzib052G0445 Durio zibethinus
Duzib151G0940 Durio zibethinus
Duzib212G0625 Durio zibethinus
ECA233G1326 Erigeron canadensis
EL10Ac3g06588 Beta vulgaris
Eucgr.B01308 Eucalyptus grandis
FAN07G2874 Fragaria x ananassa
FAN12G0915 Fragaria x ananassa
FAN12G0931 Fragaria x ananassa
FAN17G0015 Fragaria x ananassa
FvH4_4g17930 Fragaria vesca
Glyma.09G045300 Glycine max
Glyma.15G147300 Glycine max
Gohir.A09G239500 Gossypium hirsutum
Gohir.A10G163700 Gossypium hirsutum
Gohir.D09G240400 Gossypium hirsutum
Gohir.D10G170100 Gossypium hirsutum
Gorai.006G263400 Gossypium raimondii
Gorai.011G189600 Gossypium raimondii
GSVIVG01017752001 Vitis vinifera
HanXRQChr08g0227651 Helianthus annuus
Haze_01214 Corylus avellana
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla
HPP92_017216 Vanilla planifolia
Hund20562 Selenicereus undatus
Lalb_Chr15g0083521 Lupinus albus
Lj6g0006694 Lotus japonicus
Lsat_1_v5_gn_6_15060 Lactuca sativa
Manes.03G194500 Manihot esculenta
Manes.15G012900 Manihot esculenta
MBI19_g20884_MAGBIO Magnolia biondii
MBI19_g42338_MAGBIO Magnolia biondii
MD13G1169300 Malus domestica
MD16G1170500 Malus domestica
Medtr2g436860 Medicago truncatula
MELO3C006659.2 Cucumis melo
Migut.G00270 Erythranthe guttata
MSTRG.21797 Avicennia marina
Nitab4.5_0000960g0100 Nicotiana tabacum
Nitab4.5_0005076g0040 Nicotiana tabacum
Nn3g21430 Nelumbo nucifera
Nn4g25876 Nelumbo nucifera
Oeu037752.1 Olea europaea
Os12g0541400 Oryza sativa ssp. japonica
Peaxi162Scf00024g00041 Petunia axillaris
Peaxi162Scf00024g00231 Petunia axillaris
Peaxi162Scf00534g00017 Petunia axillaris
PGSC0003DMG400011322 Solanum tuberosum
Phvul.009G247500 Phaseolus vulgaris
Potri.008G207500 Populus trichocarpa
Potri.010G024600 Populus trichocarpa
Prupe.1G137900 Prunus persica
Psat1g153440 Pisum sativum
PSO170G6252 Papaver somniferum
PSO210G7501 Papaver somniferum
QL06p008791 Quercus lobata
RcHm_v2.0_Chr4g0422101 Rosa chinensis
Sabra10G0014400 Salix brachista
SalBow2G1281 Salvia bowleyana
Sc19g0005170 Simmondsia chinensis
Sed0000550 Sechium edule
Sed0003703 Sechium edule
SGA_v2.0_scaffold147G36286 Striga asiatica
SHI02083 Sapria himalayana
Solyc01g066900.4 Solanum lycopersicum
Sopen01g028510 Solanum pennellii
Sp7g14160 Schrenkiella parvula
TAR362G0876 Trochodendron aralioides
TAR365G1095 Trochodendron aralioides
THA.LOC104820261 Tarenaya hassleriana
THA.LOC104821772 Tarenaya hassleriana
Thecc.04G284000 Theobroma cacao
Thhalv10026485m.g Eutrema salsugineum
TPR.G425 Trifolium pratense
TWI09G1121 Tripterygium wilfordii
TWI53G1176 Tripterygium wilfordii
unitig_37.g12394 Utricularia gibba
unitig_46.g18688 Utricularia gibba
vmacro08144 Vaccinium macrocarpon
vmacro22972 Vaccinium macrocarpon
VMungo1309G0351 Vigna mungo
Zm00001eb137600 Zea mays

User provided reference genes

Program Settings