Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04900 Brassica napus
A10p21140 Brassica napus
Aa31LG11G11170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis
Ah.06g191200 Amaranthus hybridus
AL6G29690 Arabidopsis lyrata
Aqoxy1G00086 Aquilegia oxysepala
AT5G18440 Arabidopsis thaliana
ATR0068G071 Amborella trichopoda
Atru.chr12.1182 Acer truncatum
AUR62014308 Chenopodium quinoa
AUR62034103 Chenopodium quinoa
BcaB05g23323 Brassica carinata
BcaB08g36679 Brassica carinata
BcaC04g18692 Brassica carinata
BolC2t06894H Brassica oleracea
BolC9t58690H Brassica oleracea
BraA10t44177Z Brassica rapa
C02p09870 Brassica napus
C09p58250 Brassica napus
CAN.G134.56 Capsicum annuum
CANSAT56G0860 Cannabis sativa
CARHR194580 Cardamine hirsuta
Carub.0006s1670 Capsella rubella
Ca_03601_v3 Cicer arietinum L.
CBR_g22941 Chara braunii
Cc02_g32070 Coffea canephora
Cfa010452 Carpinus fangiana
Ciclev10015184m.g Citrus clementina
CiPaw.13G047100 Carya illinoinensis
ClCG08G008520 Citrullus lanatus
COL.COLO4_28900 Corchorus olitorius
COL.COLO4_28901 Corchorus olitorius
Cpa.g.sc163.26 Carica papaya
Cre17.g729050 Chlamydomonas reinhardtii
CsaV3_6G004530 Cucumis sativus L.
CSS0030010 Camellia sinensis var. sinensis
CSS0042038 Camellia sinensis var. sinensis
DCAR_006628 Daucus carota
Dinv24591 Davidia involucrata
Duzib128G0030 Durio zibethinus
ECA232G4797 Erigeron canadensis
EL10Ac4g08778 Beta vulgaris
Eucgr.J00311 Eucalyptus grandis
FAN19G2415 Fragaria x ananassa
FAN23G2020 Fragaria x ananassa
FAN26G3384 Fragaria x ananassa
FAN28G2084 Fragaria x ananassa
FvH4_1g30390 Fragaria vesca
Glyma.14G084400 Glycine max
Glyma.17G240500 Glycine max
Gohir.A06G171400 Gossypium hirsutum
Gohir.D06G179500 Gossypium hirsutum
Gorai.010G210100 Gossypium raimondii
GSVIVG01027215001 Vitis vinifera
HanXRQChr09g0250361 Helianthus annuus
Haze_03406 Corylus avellana
HPP92_007508 Vanilla planifolia
Hund06826 Selenicereus undatus
Lalb_Chr25g0284721 Lupinus albus
Lj3g0008993 Lotus japonicus
Lj7A493G35 Lonicera japonica
Lj7A493T43 Lonicera japonica
Lsat_1_v5_gn_4_139420 Lactuca sativa
Lsat_1_v5_gn_4_139860 Lactuca sativa
Manes.07G082900 Manihot esculenta
Mapoly0025s0136 Marchantia polymorpha
MBI15_g36944_MAGBIO Magnolia biondii
MCO10G066 Micromonas commoda
MD02G1263300 Malus domestica
MD07G1054700 Malus domestica
Medtr2g067220 Medicago truncatula
MELO3C019922.2 Cucumis melo
Migut.N01879 Erythranthe guttata
Migut.N01880 Erythranthe guttata
Migut.O00435 Erythranthe guttata
MSTRG.5086 Avicennia marina
Nitab4.5_0001611g0090 Nicotiana tabacum
Nitab4.5_0005056g0030 Nicotiana tabacum
Nn2g14019 Nelumbo nucifera
Os01g0814000 Oryza sativa ssp. japonica
Peaxi162Scf00558g00016 Petunia axillaris
Peaxi162Scf00647g00315 Petunia axillaris
PGR044G1203 Punica granatum
PGSC0003DMG400027524 Solanum tuberosum
Phvul.011G216700 Phaseolus vulgaris
Potri.008G012250 Populus trichocarpa
Potri.010G246500 Populus trichocarpa
Pp3c27_4140 Physcomitrium patens
PRCOL_00006896 Prasinoderma coloniale
Prupe.2G061400 Prunus persica
Psat0s1639g0200 Pisum sativum
Psat1g013640 Pisum sativum
Psat2g067120 Pisum sativum
Psat2g100040 Pisum sativum
PSO339G3483 Papaver somniferum
PSO384G1654 Papaver somniferum
QL04p050382 Quercus lobata
RcHm_v2.0_Chr3g0490591 Rosa chinensis
Rhsim01G0121600 Rhododendron simsii
Sabra08G0007500 Salix brachista
Sabra10G0192200 Salix brachista
SalBow4G0879 Salvia bowleyana
Sc09g0004890 Simmondsia chinensis
Sed0008467 Sechium edule
SGA_v2.0_scaffold196G40987 Striga asiatica
Solyc01g096920.3 Solanum lycopersicum
Sopen01g040630 Solanum pennellii
Sp6g25880 Schrenkiella parvula
TAR369G0954 Trochodendron aralioides
THA.LOC104811338 Tarenaya hassleriana
THA.LOC104824416 Tarenaya hassleriana
Thecc.10G129200 Theobroma cacao
Thhalv10013325m.g Eutrema salsugineum
TPR.G33809 Trifolium pratense
TWI38G0042 Tripterygium wilfordii
unitig_899.g15585 Utricularia gibba
vmacro20846 Vaccinium macrocarpon
VMungo0647G0438 Vigna mungo
Zm00001eb149940 Zea mays

User provided reference genes

Program Settings