Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p00880 Brassica napus
Aa31LG6G9940 Aethionema arabicum
Actinidia17784 Actinidia chinensis
AL1G51600 Arabidopsis lyrata
Aqoxy5G00857 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea
AT1G43245 Arabidopsis thaliana
ATR0820G173 Amborella trichopoda
Atru.chr13.2084 Acer truncatum
AUR62026687 Chenopodium quinoa
AUR62040600 Chenopodium quinoa
BcaB01g02294 Brassica carinata
BcaC04g24108 Brassica carinata
BolC9t53031H Brassica oleracea
BraA09t35760Z Brassica rapa
C09p00980 Brassica napus
CAN.G1215.10 Capsicum annuum
CANSAT25G3857 Cannabis sativa
CARHR035370 Cardamine hirsuta
Carub.0001s3453 Capsella rubella
Carub.0001s3454 Capsella rubella
Ca_26954_v3 Cicer arietinum L.
Cc10_g14930 Coffea canephora
CDE12G0089 Ceratophyllum demersum
Cfa018312 Carpinus fangiana
Ciclev10000601m.g Citrus clementina
CiPaw.16G011000 Carya illinoinensis
ClCG08G002210 Citrullus lanatus
COL.COLO4_29857 Corchorus olitorius
Cpa.g.sc1027.1 Carica papaya
CsaV3_6G002600 Cucumis sativus L.
CSS0011701 Camellia sinensis var. sinensis
CSS0020422 Camellia sinensis var. sinensis
CSS0020713 Camellia sinensis var. sinensis
CSS0028068 Camellia sinensis var. sinensis
CSS0046539 Camellia sinensis var. sinensis
DCAR_010095 Daucus carota
Dinv41067 Davidia involucrata
Duzib093G1010 Durio zibethinus
ECA232G1953 Erigeron canadensis
EL10Ac1g01568 Beta vulgaris
Eucgr.F02698 Eucalyptus grandis
FAN24G1213 Fragaria x ananassa
FAN27G2814 Fragaria x ananassa
FvH4_2g13430 Fragaria vesca
Glyma.16G166267 Glycine max
Glyma.16G166333 Glycine max
Glyma.16G166500 Glycine max
Gohir.1Z049355 Gossypium hirsutum
Gohir.A06G112504 Gossypium hirsutum
Gohir.D06G116900 Gossypium hirsutum
Gorai.010G134600 Gossypium raimondii
GSVIVG01034549001 Vitis vinifera
HanXRQChr11g0320291 Helianthus annuus
Haze_17767 Corylus avellana
HPP92_009296 Vanilla planifolia
HPP92_009297 Vanilla planifolia
Hund26691 Selenicereus undatus
Lalb_Chr01g0009551 Lupinus albus
Lalb_Chr01g0009561 Lupinus albus
Lj2g0009741 Lotus japonicus
Lj2g0026984 Lotus japonicus
Lj7A376T34 Lonicera japonica
Lsat_1_v5_gn_9_41180 Lactuca sativa
Manes.02G180601 Manihot esculenta
MBI17_g41095_MAGBIO Magnolia biondii
MCO09G489 Micromonas commoda
MD05G1027900 Malus domestica
Medtr2g045070 Medicago truncatula
Medtr3g062560 Medicago truncatula
MELO3C025024.2 Cucumis melo
Migut.N03207 Erythranthe guttata
MSTRG.24217 Avicennia marina
Nitab4.5_0001187g0100 Nicotiana tabacum
Nitab4.5_0002764g0020 Nicotiana tabacum
Nn5g28769 Nelumbo nucifera
Oeu031098.1 Olea europaea
Os04g0423600 Oryza sativa ssp. japonica
Peaxi162Scf00599g00121 Petunia axillaris
PGR042G1662 Punica granatum
PGSC0003DMG400024094 Solanum tuberosum
Phvul.004G094200 Phaseolus vulgaris
Potri.005G193500 Populus trichocarpa
Potri.005G193701 Populus trichocarpa
Prupe.8G033600 Prunus persica
Psat1g102000 Pisum sativum
PSO675G4790 Papaver somniferum
QL02p038810 Quercus lobata
QL09p013340 Quercus lobata
RcHm_v2.0_Chr5g0050861 Rosa chinensis
RcHm_v2.0_Chr6g0275051 Rosa chinensis
Rhsim05G0181200 Rhododendron simsii
SalBow6G6609 Salvia bowleyana
Sc02g0003940 Simmondsia chinensis
Sc02g0003950 Simmondsia chinensis
Sc02g0003960 Simmondsia chinensis
Sed0009104 Sechium edule
SEGI_02927 Sequoiadendron giganteum
SEGI_11470 Sequoiadendron giganteum
SEGI_19552 Sequoiadendron giganteum
SEGI_20433 Sequoiadendron giganteum
SEGI_34185 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11186 Striga asiatica
SHI09071 Sapria himalayana
Sopen04g027550 Solanum pennellii
Sp1g32410 Schrenkiella parvula
TAR381G0879 Trochodendron aralioides
TAR381G1110 Trochodendron aralioides
TAR381G1273 Trochodendron aralioides
THA.LOC104804670 Tarenaya hassleriana
Thecc.08G154500 Theobroma cacao
Thhalv10003905m.g Eutrema salsugineum
TPR.G23114 Trifolium pratense
TWI34G0194 Tripterygium wilfordii
unitig_21.g20147 Utricularia gibba
vmacro20039 Vaccinium macrocarpon
VMungo0464G1764 Vigna mungo
Zm00001eb083170 Zea mays

User provided reference genes

Program Settings