Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p22600 Brassica napus
Aa31LG11G13040 Aethionema arabicum
Actinidia28805 Actinidia chinensis
Actinidia35727 Actinidia chinensis
AL6G27570 Arabidopsis lyrata
Aqoxy1G00382 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea
AT5G16610 Arabidopsis thaliana
ATR0171G009 Amborella trichopoda
ATR0171G025 Amborella trichopoda
ATR0495G003 Amborella trichopoda
ATR1084G001 Amborella trichopoda
Atru.chr1.1941 Acer truncatum
Atru.chr1.1942 Acer truncatum
AUR62018217 Chenopodium quinoa
AUR62018218 Chenopodium quinoa
AUR62037796 Chenopodium quinoa
BcaB08g36834 Brassica carinata
BolC9t58884H Brassica oleracea
BraA10t44322Z Brassica rapa
C09p60510 Brassica napus
CAN.G222.36 Capsicum annuum
CANSAT78G1609 Cannabis sativa
CARHR196610 Cardamine hirsuta
Carub.0006s1481 Capsella rubella
Ca_05830_v3 Cicer arietinum L.
CBR_g12792 Chara braunii
Cc07_g13380 Coffea canephora
CDE07G1834 Ceratophyllum demersum
Cfa007804 Carpinus fangiana
Ciclev10011142m.g Citrus clementina
CiPaw.03G072400 Carya illinoinensis
CiPaw.03G072500 Carya illinoinensis
ClCG01G008770 Citrullus lanatus
COL.COLO4_25904 Corchorus olitorius
Cpa.g.sc116.59 Carica papaya
CsaV3_5G024210 Cucumis sativus L.
CSS0024067 Camellia sinensis var. sinensis
CSS0030104 Camellia sinensis var. sinensis
CSS0036373 Camellia sinensis var. sinensis
DCAR_014171 Daucus carota
Dinv19038 Davidia involucrata
Dinv28198 Davidia involucrata
Duzib211G0559 Durio zibethinus
ECA247G1081 Erigeron canadensis
EL10Ac2g03178 Beta vulgaris
Eucgr.F02862 Eucalyptus grandis
Eucgr.F02863 Eucalyptus grandis
FAN23G2031 Fragaria x ananassa
FAN26G1526 Fragaria x ananassa
FvH4_1g25400 Fragaria vesca
Glyma.14G214400 Glycine max
Gohir.A07G178400 Gossypium hirsutum
Gohir.D07G184700 Gossypium hirsutum
Gorai.001G205100 Gossypium raimondii
GSVIVG01030704001 Vitis vinifera
HanXRQChr15g0483231 Helianthus annuus
Haze_14269 Corylus avellana
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla
HPP92_011097 Vanilla planifolia
HPP92_011112 Vanilla planifolia
Hund13103 Selenicereus undatus
Lalb_Chr04g0251401 Lupinus albus
LjContig00141g0000721 Lotus japonicus
Lsat_1_v5_gn_3_63641 Lactuca sativa
Manes.02G077300 Manihot esculenta
MD15G1138100 Malus domestica
Medtr5g078170 Medicago truncatula
MELO3C022869.2 Cucumis melo
Migut.K00904 Erythranthe guttata
Nitab4.5_0000201g0160 Nicotiana tabacum
Nitab4.5_0006893g0050 Nicotiana tabacum
Nn4g24295 Nelumbo nucifera
Oeu032319.1 Olea europaea
Oeu032321.1 Olea europaea
Os03g0221300 Oryza sativa ssp. japonica
Peaxi162Scf00305g00412 Petunia axillaris
Peaxi162Scf00305g00413 Petunia axillaris
PGR031G2162 Punica granatum
Phvul.008G236600 Phaseolus vulgaris
Potri.017G130400 Populus trichocarpa
Pp3c23_20330 Physcomitrium patens
Pp3c24_16350 Physcomitrium patens
Prupe.4G281200 Prunus persica
Psat2g047840 Pisum sativum
PSO017G5883 Papaver somniferum
PSO063G0106 Papaver somniferum
PSO478G0421 Papaver somniferum
QL02p058308 Quercus lobata
QL10p014398 Quercus lobata
QL93p0100_0715 Quercus lobata
QL93p0100_0719 Quercus lobata
QL93p0100_0723 Quercus lobata
QL93p0100_0731 Quercus lobata
RcHm_v2.0_Chr2g0123431 Rosa chinensis
Rhsim08G0018800 Rhododendron simsii
Sabra17G0108600 Salix brachista
SalBow5G2523 Salvia bowleyana
SalBow5G2948 Salvia bowleyana
Sc11g0004560 Simmondsia chinensis
Sed0011157 Sechium edule
SEGI_28129 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17176 Striga asiatica
SHI30108 Sapria himalayana
SMO340G0205 Selaginella moellendorffii
Solyc11g011060.3 Solanum lycopersicum
Sopen11g005830 Solanum pennellii
Sp6g27560 Schrenkiella parvula
TAR629G3521 Trochodendron aralioides
THA.LOC104820908 Tarenaya hassleriana
Thecc.04G114100 Theobroma cacao
Thhalv10012945m.g Eutrema salsugineum
TPR.G8266 Trifolium pratense
TWI74G0031 Tripterygium wilfordii
TWI77G0889 Tripterygium wilfordii
unitig_748.g8636 Utricularia gibba
vmacro18531 Vaccinium macrocarpon
vmacro18532 Vaccinium macrocarpon
VMungo0647G1195 Vigna mungo

User provided reference genes

Program Settings