Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04700 Brassica napus
A10p26910 Brassica napus
Aa31LG3G16430 Aethionema arabicum
Actinidia22256 Actinidia chinensis
Ah.10g024780 Amaranthus hybridus
AL6G21240 Arabidopsis lyrata
Aqoxy7G02908 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea
AT5G10700 Arabidopsis thaliana
ATR0580G320 Amborella trichopoda
Atru.chr7.2653 Acer truncatum
AUR62020287 Chenopodium quinoa
AUR62037716 Chenopodium quinoa
BcaB01g05507 Brassica carinata
BcaB01g06271 Brassica carinata
BcaC04g19291 Brassica carinata
BraA03t09810Z Brassica rapa
C03p05410 Brassica napus
CAN.G566.65 Capsicum annuum
CANSAT78G2093 Cannabis sativa
CARHR202620 Cardamine hirsuta
Carub.0006s0917 Capsella rubella
Ca_15656_v3 Cicer arietinum L.
Ca_15664_v3 Cicer arietinum L.
CBR_g3167 Chara braunii
CDE02G4751 Ceratophyllum demersum
CDE06G2578 Ceratophyllum demersum
Cfa013279 Carpinus fangiana
Ciclev10009845m.g Citrus clementina
CiPaw.07G211900 Carya illinoinensis
CiPaw.08G020300 Carya illinoinensis
ClCG08G012660 Citrullus lanatus
COL.COLO4_19024 Corchorus olitorius
Cpa.g.sc23.24 Carica papaya
Cre10.g449350 Chlamydomonas reinhardtii
CsaV3_2G031370 Cucumis sativus L.
CSS0022194 Camellia sinensis var. sinensis
DCAR_006314 Daucus carota
Dinv26561 Davidia involucrata
Duzib168G0001 Durio zibethinus
Duzib187G1270 Durio zibethinus
ECA246G3311 Erigeron canadensis
EL10Ac2g02413 Beta vulgaris
Eucgr.C04010 Eucalyptus grandis
FAN20G0608 Fragaria x ananassa
FAN27G0070 Fragaria x ananassa
FvH4_2g36680 Fragaria vesca
Glyma.04G075900 Glycine max
Glyma.06G077100 Glycine max
Gohir.A06G105300 Gossypium hirsutum
Gohir.D06G107400 Gossypium hirsutum
Gorai.010G122100 Gossypium raimondii
GSVIVG01035513001 Vitis vinifera
HanXRQChr17g0538031 Helianthus annuus
Haze_21752 Corylus avellana
Haze_21755 Corylus avellana
Haze_27087 Corylus avellana
HPP92_021941 Vanilla planifolia
HPP92_021967 Vanilla planifolia
Hund07113 Selenicereus undatus
Lalb_Chr23g0269141 Lupinus albus
Lj1g0012669 Lotus japonicus
Lj7C748T8 Lonicera japonica
Lsat_1_v5_gn_3_19441 Lactuca sativa
Manes.03G004300 Manihot esculenta
Mapoly0013s0161 Marchantia polymorpha
MBI14_g10732_MAGBIO Magnolia biondii
MCO07G367 Micromonas commoda
MD08G1127800 Malus domestica
MD15G1107200 Malus domestica
Medtr3g108900 Medicago truncatula
MELO3C011186.2 Cucumis melo
Migut.A00436 Erythranthe guttata
MSTRG.25780 Avicennia marina
Nitab4.5_0001159g0140 Nicotiana tabacum
Nitab4.5_0010092g0010 Nicotiana tabacum
Nn3g19671 Nelumbo nucifera
Oeu018568.1 Olea europaea
Os04g0605200 Oryza sativa ssp. japonica
Peaxi162Scf00459g00840 Petunia axillaris
PGR044G2738 Punica granatum
PGSC0003DMG400029370 Solanum tuberosum
PGSC0003DMG400038395 Solanum tuberosum
Phvul.009G101700 Phaseolus vulgaris
Potri.018G008000 Populus trichocarpa
Pp3c18_3890 Physcomitrium patens
PRCOL_00004161 Prasinoderma coloniale
Prupe.1G459500 Prunus persica
Psat0s1809g0040 Pisum sativum
PSO063G0792 Papaver somniferum
PSO170G0804 Papaver somniferum
QL12p025335 Quercus lobata
RcHm_v2.0_Chr1g0366021 Rosa chinensis
RcHm_v2.0_Chr6g0305051 Rosa chinensis
Rhsim07G0178100 Rhododendron simsii
Sabra18G0015100 Salix brachista
SalBow4G1165 Salvia bowleyana
SalBow6G3571 Salvia bowleyana
Sc06g0000170 Simmondsia chinensis
Sed0005624 Sechium edule
Sed0007748 Sechium edule
SEGI_18071 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40663 Striga asiatica
SMO203G0167 Selaginella moellendorffii
Solyc12g096390.2 Solanum lycopersicum
Sopen12g032240 Solanum pennellii
Sp6g32760 Schrenkiella parvula
Sp6g32770 Schrenkiella parvula
TAR636G3689 Trochodendron aralioides
THA.LOC104814973 Tarenaya hassleriana
Thecc.09G008100 Theobroma cacao
Thhalv10014763m.g Eutrema salsugineum
TPR.G12362 Trifolium pratense
TWI34G0378 Tripterygium wilfordii
unitig_21.g20325 Utricularia gibba
unitig_32.g10946 Utricularia gibba
vmacro05047 Vaccinium macrocarpon
VMungo1309G0608 Vigna mungo
Zm00001eb071580 Zea mays

User provided reference genes

Program Settings