Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p17330 Brassica napus
A04p23730 Brassica napus
Aa31LG1G7380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis
Actinidia11153 Actinidia chinensis
Ah.01g003520 Amaranthus hybridus
AL4G26070 Arabidopsis lyrata
AL4G26150 Arabidopsis lyrata
Aqoxy1G02064 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea
AT2G31040 Arabidopsis thaliana
ATR0602G053 Amborella trichopoda
Atru.chr6.2795 Acer truncatum
Atru.chr6.2796 Acer truncatum
AUR62039018 Chenopodium quinoa
BolC3t14422H Brassica oleracea
BolC4t27520H Brassica oleracea
BraA03t11005Z Brassica rapa
BraA04t17899Z Brassica rapa
C03p20440 Brassica napus
C04p60180 Brassica napus
CAN.G1049.6 Capsicum annuum
CANSAT64G2599 Cannabis sativa
CARHR124570 Cardamine hirsuta
Carub.0004s1225 Capsella rubella
Ca_18111_v3 Cicer arietinum L.
Cc05_g08340 Coffea canephora
Cc05_g08350 Coffea canephora
CDE10G0215 Ceratophyllum demersum
CDE10G1046 Ceratophyllum demersum
Cfa023335 Carpinus fangiana
Ciclev10015418m.g Citrus clementina
CiPaw.04G132200 Carya illinoinensis
ClCG02G017820 Citrullus lanatus
COL.COLO4_33580 Corchorus olitorius
Cpa.g.sc52.174 Carica papaya
Cre01.g049600 Chlamydomonas reinhardtii
CsaV3_6G018450 Cucumis sativus L.
CSS0012388 Camellia sinensis var. sinensis
DCAR_017060 Daucus carota
Dinv15443 Davidia involucrata
EL10Ac2g03349 Beta vulgaris
Eucgr.A01914 Eucalyptus grandis
Eucgr.K01127 Eucalyptus grandis
FAN02G3357 Fragaria x ananassa
FAN09G4348 Fragaria x ananassa
FAN14G2123 Fragaria x ananassa
FvH4_6g27380 Fragaria vesca
Glyma.06G277600 Glycine max
Gohir.A12G086400 Gossypium hirsutum
Gohir.D12G085000 Gossypium hirsutum
Gorai.008G095400 Gossypium raimondii
GSVIVG01020707001 Vitis vinifera
HanXRQChr17g0557951 Helianthus annuus
Haze_13371 Corylus avellana
HPP92_009665 Vanilla planifolia
Hund07812 Selenicereus undatus
Lalb_Chr01g0006001 Lupinus albus
Lj1A681T38 Lonicera japonica
Lj3g0015335 Lotus japonicus
Lju1655A0G36 Lonicera japonica
Lsat_1_v5_gn_2_38761 Lactuca sativa
Lsat_1_v5_gn_8_140640 Lactuca sativa
Manes.01G133200 Manihot esculenta
Manes.02G091200 Manihot esculenta
Mapoly0038s0046 Marchantia polymorpha
MCO04G044 Micromonas commoda
MD09G1238000 Malus domestica
MD17G1230900 Malus domestica
Medtr4g079850 Medicago truncatula
MELO3C013567.2 Cucumis melo
Migut.M00261 Erythranthe guttata
MSTRG.15092 Avicennia marina
Nitab4.5_0000537g0130 Nicotiana tabacum
Nitab4.5_0001095g0100 Nicotiana tabacum
Nitab4.5_0009754g0010 Nicotiana tabacum
Nitab4.5_0011277g0010 Nicotiana tabacum
Oeu018752.1 Olea europaea
Os01g0673800 Oryza sativa ssp. japonica
Peaxi162Scf00384g00423 Petunia axillaris
Peaxi162Scf00469g00217 Petunia axillaris
PGR042G0843 Punica granatum
PGSC0003DMG400007857 Solanum tuberosum
PGSC0003DMG400020443 Solanum tuberosum
Phvul.011G130500 Phaseolus vulgaris
Potri.014G142200 Populus trichocarpa
Pp3c8_13580 Physcomitrium patens
PRCOL_00001453 Prasinoderma coloniale
Prupe.3G118500 Prunus persica
Psat7g165360 Pisum sativum
PSO229G0039 Papaver somniferum
PSO675G3944 Papaver somniferum
QL08p041638 Quercus lobata
QL08p041677 Quercus lobata
RcHm_v2.0_Chr2g0129651 Rosa chinensis
Rhsim06G0131200 Rhododendron simsii
Sabra14G0107300 Salix brachista
Sc06g0009080 Simmondsia chinensis
Sed0000889 Sechium edule
Sed0016519 Sechium edule
SEGI_23271 Sequoiadendron giganteum
SGA_v2.0_scaffold9G04816 Striga asiatica
SMO014G0045 Selaginella moellendorffii
Solyc07g055050.3 Solanum lycopersicum
Solyc12g010870.3 Solanum lycopersicum
Sopen07g027160 Solanum pennellii
Sopen12g006230 Solanum pennellii
Sp4g13510 Schrenkiella parvula
TAR626G0153 Trochodendron aralioides
Thecc.01G150500 Theobroma cacao
Thhalv10016897m.g Eutrema salsugineum
TPR.G28306 Trifolium pratense
TPR.G33085 Trifolium pratense
TWI59G0496 Tripterygium wilfordii
unitig_0.g2026 Utricularia gibba
vmacro12375 Vaccinium macrocarpon
vmacro12376 Vaccinium macrocarpon
VMungo1127G1340 Vigna mungo
Zm00001eb360100 Zea mays

User provided reference genes

Program Settings