Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03880 Brassica napus
A03p63030 Brassica napus
A08p16710 Brassica napus
Actinidia00546 Actinidia chinensis
AL3G52540 Arabidopsis lyrata
AL7G16600 Arabidopsis lyrata
Aqoxy5G01556 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GKZX65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JP7MPK Arachis hypogaea
AT2G16385 Arabidopsis thaliana
AT4G34600 Arabidopsis thaliana
ATR0585G050 Amborella trichopoda
BcaB03g11823 Brassica carinata
BcaC01g00889 Brassica carinata
BcaNung00683 Brassica carinata
BcaNung04921 Brassica carinata
BolC1t00407H Brassica oleracea
BolC3t20851H Brassica oleracea
BolC7t46496H Brassica oleracea
BraA01t00375Z Brassica rapa
BraA03t15377Z Brassica rapa
BraA08t33636Z Brassica rapa
C01p04190 Brassica napus
C03p85630 Brassica napus
C07p60660 Brassica napus
CAN.G1544.5 Capsicum annuum
CANSAT11G0932 Cannabis sativa
CARHR242800 Cardamine hirsuta
Carub.0003s3015 Capsella rubella
Carub.0007s0568 Capsella rubella
Cc00_g15110 Coffea canephora
CDE06G1180 Ceratophyllum demersum
Ciclev10030122m.g Citrus clementina
CiPaw.05G069100 Carya illinoinensis
CiPaw.05G069300 Carya illinoinensis
CiPaw.05G069400 Carya illinoinensis
CiPaw.06G132900 Carya illinoinensis
ClCG11G004170 Citrullus lanatus
COL.COLO4_25981 Corchorus olitorius
CsaV3_2G015000 Cucumis sativus L.
CSS0004191 Camellia sinensis var. sinensis
CSS0036321 Camellia sinensis var. sinensis
CSS0048821 Camellia sinensis var. sinensis
DCAR_001560 Daucus carota
DCAR_004781 Daucus carota
Dinv23490 Davidia involucrata
Dinv42040 Davidia involucrata
Duzib132G0715 Durio zibethinus
Duzib248G1522 Durio zibethinus
Eucgr.G01694 Eucalyptus grandis
Eucgr.I01291 Eucalyptus grandis
FAN15G0999 Fragaria x ananassa
FAN20G2766 Fragaria x ananassa
FAN24G2625 Fragaria x ananassa
FAN27G2049 Fragaria x ananassa
FvH4_2g09570 Fragaria vesca
Glyma.06G010000 Glycine max
Glyma.08G235100 Glycine max
Glyma.12G235600 Glycine max
Glyma.13G201100 Glycine max
Gohir.A03G196700 Gossypium hirsutum
Gohir.A13G032600 Gossypium hirsutum
Gohir.D02G217900 Gossypium hirsutum
Gohir.D13G030800 Gossypium hirsutum
Gorai.005G245800 Gossypium raimondii
Gorai.013G035000 Gossypium raimondii
GSVIVG01023821001 Vitis vinifera
HanXRQChr04g0127791 Helianthus annuus
HanXRQChr16g0505401 Helianthus annuus
Hma1.2p1_0066F.1_g036140 Hydrangea macrophylla
HPP92_010634 Vanilla planifolia
HPP92_017191 Vanilla planifolia
Hund06253 Selenicereus undatus
Lalb_Chr01g0007961 Lupinus albus
Lalb_Chr03g0032901 Lupinus albus
Lj1g0004010 Lotus japonicus
Lj3g0013236 Lotus japonicus
Lsat_1_v5_gn_7_91560 Lactuca sativa
Manes.04G087299 Manihot esculenta
Manes.11G091700 Manihot esculenta
MBI10_g00752_MAGBIO Magnolia biondii
MBI16_g36843_MAGBIO Magnolia biondii
MD05G1061400 Malus domestica
MD10G1069300 Malus domestica
Medtr8g037800 Medicago truncatula
MELO3C023320.2 Cucumis melo
Migut.B00211 Erythranthe guttata
Nitab4.5_0001413g0050 Nicotiana tabacum
Nitab4.5_0003234g0120 Nicotiana tabacum
Nitab4.5_0007454g0010 Nicotiana tabacum
Nitab4.5_0013456g0010 Nicotiana tabacum
Peaxi162Scf00016g00429 Petunia axillaris
Peaxi162Scf00684g00234 Petunia axillaris
PGR042G3893 Punica granatum
PGSC0003DMG400030948 Solanum tuberosum
Phvul.011G210100 Phaseolus vulgaris
Potri.009G119900 Populus trichocarpa
Prupe.8G091200 Prunus persica
Psat4g192840 Pisum sativum
PSO591G0314 Papaver somniferum
PSO675G5127 Papaver somniferum
QL11p045203 Quercus lobata
RcHm_v2.0_Chr6g0265861 Rosa chinensis
Rhsim05G0071400 Rhododendron simsii
SalBow6G5689 Salvia bowleyana
Sc18g0005100 Simmondsia chinensis
Sed0023451 Sechium edule
Solyc01g109895.1 Solanum lycopersicum
Sopen01g052090 Solanum pennellii
Sp7g32390 Schrenkiella parvula
TAR628G0615 Trochodendron aralioides
THA.LOC104819621 Tarenaya hassleriana
Thecc.02G080700 Theobroma cacao
Thhalv10026702m.g Eutrema salsugineum
TPR.G1848 Trifolium pratense
TWI31G1476 Tripterygium wilfordii
TWI79G1416 Tripterygium wilfordii
Zm00001eb304080 Zea mays

User provided reference genes

Program Settings