Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p37760 Brassica napus
Aa31LG4G9090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis
Actinidia23025 Actinidia chinensis
Ah.05g168760 Amaranthus hybridus
AL2G31160 Arabidopsis lyrata
Aqoxy5G00849 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea
AT1G71500 Arabidopsis thaliana
ATR1089G004 Amborella trichopoda
Atru.chr13.2467 Acer truncatum
AUR62022402 Chenopodium quinoa
AUR62043541 Chenopodium quinoa
BcaC08g46585 Brassica carinata
BraA07t31340Z Brassica rapa
C06p45640 Brassica napus
CAN.G83.1 Capsicum annuum
CANSAT21G2558 Cannabis sativa
CARHR291180 Cardamine hirsuta
Carub.0002s1836 Capsella rubella
Ca_24481_v3 Cicer arietinum L.
Cc10_g09110 Coffea canephora
CDE05G1864 Ceratophyllum demersum
CDE05G2117 Ceratophyllum demersum
CDE05G3037 Ceratophyllum demersum
Cfa008102 Carpinus fangiana
Ciclev10021386m.g Citrus clementina
CiPaw.03G016600 Carya illinoinensis
ClCG08G000730 Citrullus lanatus
COL.COLO4_14973 Corchorus olitorius
Cpa.g.sc21.64 Carica papaya
Cre02.g093650 Chlamydomonas reinhardtii
Cre09.g411200 Chlamydomonas reinhardtii
CsaV3_5G040160 Cucumis sativus L.
CSS0006473 Camellia sinensis var. sinensis
CSS0045264 Camellia sinensis var. sinensis
DCAR_017362 Daucus carota
Dinv09402 Davidia involucrata
Duzib177G0086 Durio zibethinus
ECA247G0737 Erigeron canadensis
EL10Ac1g01712 Beta vulgaris
Eucgr.F02968 Eucalyptus grandis
FAN19G1869 Fragaria x ananassa
FAN23G3093 Fragaria x ananassa
FAN26G2368 Fragaria x ananassa
FAN28G2783 Fragaria x ananassa
FvH4_1g25280 Fragaria vesca
Glyma.01G231900 Glycine max
Gohir.A05G252900 Gossypium hirsutum
Gohir.D05G254800 Gossypium hirsutum
Gorai.009G266300 Gossypium raimondii
GSVIVG01034644001 Vitis vinifera
GSVIVG01036421001 Vitis vinifera
GSVIVG01036428001 Vitis vinifera
HanXRQChr04g0102641 Helianthus annuus
Haze_13934 Corylus avellana
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla
HPP92_019451 Vanilla planifolia
Lalb_Chr16g0376791 Lupinus albus
Lj9A700T90 Lonicera japonica
LjContig00222g0026492 Lotus japonicus
Lsat_1_v5_gn_1_25180 Lactuca sativa
Manes.02G208400 Manihot esculenta
Manes.18G119400 Manihot esculenta
Mapoly0043s0097 Marchantia polymorpha
MBI06_g35694_MAGBIO Magnolia biondii
MCO05G575 Micromonas commoda
MCO14G230 Micromonas commoda
MD15G1137600 Malus domestica
Medtr5g008750 Medicago truncatula
MELO3C022193.2 Cucumis melo
Migut.C01361 Erythranthe guttata
MSTRG.1587 Avicennia marina
Nitab4.5_0003013g0020 Nicotiana tabacum
Nitab4.5_0004761g0020 Nicotiana tabacum
Nitab4.5_0010632g0010 Nicotiana tabacum
Nn5g27416 Nelumbo nucifera
Oeu023205.1 Olea europaea
Os11g0242400 Oryza sativa ssp. japonica
Peaxi162Scf00078g00341 Petunia axillaris
PGR042G1281 Punica granatum
PGSC0003DMG400017809 Solanum tuberosum
Phvul.002G035200 Phaseolus vulgaris
Potri.019G073900 Populus trichocarpa
Pp3c6_9090 Physcomitrium patens
PRCOL_00001119 Prasinoderma coloniale
Prupe.1G128000 Prunus persica
Psat0s3069g0040 Pisum sativum
PSO017G7034 Papaver somniferum
PSO170G2989 Papaver somniferum
QL09p003717 Quercus lobata
QL09p003724 Quercus lobata
QL09p003744 Quercus lobata
RcHm_v2.0_Chr2g0123251 Rosa chinensis
Rhsim12G0004800 Rhododendron simsii
Sabra19G0085000 Salix brachista
SalBow7G1428 Salvia bowleyana
Sc02g0003840 Simmondsia chinensis
Sed0015713 Sechium edule
SEGI_25869 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32591 Striga asiatica
SGA_v2.0_scaffold24G10633 Striga asiatica
SGA_v2.0_scaffold7G03910 Striga asiatica
SMO139G0118 Selaginella moellendorffii
Solyc11g042640.2 Solanum lycopersicum
Sopen11g018800 Solanum pennellii
Sp5g26650 Schrenkiella parvula
TAR628G1481 Trochodendron aralioides
THA.LOC104800085 Tarenaya hassleriana
Thecc.08G174200 Theobroma cacao
Thhalv10018960m.g Eutrema salsugineum
TPR.G37964 Trifolium pratense
TWI75G0001 Tripterygium wilfordii
unitig_578.g16121 Utricularia gibba
unitig_8.g4892 Utricularia gibba
vmacro00956 Vaccinium macrocarpon
vmacro22748 Vaccinium macrocarpon
VMungo1215G2418 Vigna mungo
Zm00001eb142810 Zea mays

User provided reference genes

Program Settings