Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37220 Brassica napus
A05p37720 Brassica napus
Aa31LG3G5020 Aethionema arabicum
Aa31LG3G5030 Aethionema arabicum
Actinidia03903 Actinidia chinensis
Actinidia32058 Actinidia chinensis
Ah.08g210180 Amaranthus hybridus
AL3G23170 Arabidopsis lyrata
Aqoxy4G02685 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea
AT3G11620 Arabidopsis thaliana
ATR0772G132 Amborella trichopoda
Atru.chr8.1397 Acer truncatum
AUR62006266 Chenopodium quinoa
AUR62037035 Chenopodium quinoa
BcaB04g18654 Brassica carinata
BcaB06g25602 Brassica carinata
BcaC01g04099 Brassica carinata
BcaC05g29349 Brassica carinata
BolC3t16769H Brassica oleracea
BolC5t34296H Brassica oleracea
BraA03t12881Z Brassica rapa
BraA05t22567Z Brassica rapa
C03p45070 Brassica napus
C05p56320 Brassica napus
CAN.G574.36 Capsicum annuum
CANSAT64G2446 Cannabis sativa
CARHR086170 Cardamine hirsuta
Carub.0003s1094 Capsella rubella
Cc06_g06350 Coffea canephora
CDE02G1185 Ceratophyllum demersum
CDE02G4301 Ceratophyllum demersum
Cfa016668 Carpinus fangiana
Ciclev10011965m.g Citrus clementina
CiPaw.09G018700 Carya illinoinensis
ClCG04G010350 Citrullus lanatus
COL.COLO4_29616 Corchorus olitorius
Cpa.g.sc104.62 Carica papaya
Cre09.g388319 Chlamydomonas reinhardtii
CsaV3_6G040970 Cucumis sativus L.
CSS0035173 Camellia sinensis var. sinensis
DCAR_013430 Daucus carota
Duzib106G1273 Durio zibethinus
ECA233G1524 Erigeron canadensis
EL10Ac7g16816 Beta vulgaris
Eucgr.A02606 Eucalyptus grandis
FAN02G4476 Fragaria x ananassa
FAN05G0890 Fragaria x ananassa
FAN05G1672 Fragaria x ananassa
FAN09G0196 Fragaria x ananassa
FAN14G3242 Fragaria x ananassa
FvH4_6g19910 Fragaria vesca
Glyma.03G200300 Glycine max
Glyma.19G197900 Glycine max
Gohir.A04G061300 Gossypium hirsutum
Gohir.A04G061585 Gossypium hirsutum
Gohir.D04G095300 Gossypium hirsutum
Gorai.009G398000 Gossypium raimondii
GSVIVG01033928001 Vitis vinifera
HanXRQChr13g0398201 Helianthus annuus
Haze_19679 Corylus avellana
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla
HPP92_023075 Vanilla planifolia
Hund19873 Selenicereus undatus
Hund19874 Selenicereus undatus
Lalb_Chr01g0017911 Lupinus albus
Lalb_Chr20g0111471 Lupinus albus
Lj1g0003895 Lotus japonicus
Lsat_1_v5_gn_6_35180 Lactuca sativa
Manes.09G048600 Manihot esculenta
MBI17_g00993_MAGBIO Magnolia biondii
MCO04G525 Micromonas commoda
MD12G1034600 Malus domestica
MD14G1035800 Malus domestica
Medtr7g105800 Medicago truncatula
MELO3C024575.2 Cucumis melo
Migut.L01819 Erythranthe guttata
Nitab4.5_0000020g0370 Nicotiana tabacum
Nitab4.5_0000665g0040 Nicotiana tabacum
Nn6g34760 Nelumbo nucifera
Oeu017715.1 Olea europaea
Peaxi162Scf00419g00069 Petunia axillaris
PGR004G2039 Punica granatum
PGSC0003DMG400016416 Solanum tuberosum
Phvul.001G194040 Phaseolus vulgaris
Potri.016G072700 Populus trichocarpa
Pp3c13_7330 Physcomitrium patens
PRCOL_00001274 Prasinoderma coloniale
Prupe.7G098300 Prunus persica
Psat3g030240 Pisum sativum
PSO339G4581 Papaver somniferum
PSO384G4437 Papaver somniferum
QL07p037495 Quercus lobata
QL07p037513 Quercus lobata
RcHm_v2.0_Chr3g0475311 Rosa chinensis
RcHm_v2.0_Chr3g0475321 Rosa chinensis
Rhsim03G0067100 Rhododendron simsii
Sabra16G0075500 Salix brachista
Sabra16G0075600 Salix brachista
SalBow5G2063 Salvia bowleyana
Sc07g0005680 Simmondsia chinensis
Sed0011891 Sechium edule
SEGI_26711 Sequoiadendron giganteum
SGA_v2.0_scaffold184G40008 Striga asiatica
SMO165G0131 Selaginella moellendorffii
SMO272G0021 Selaginella moellendorffii
Solyc01g007790.4 Solanum lycopersicum
Sopen01g003330 Solanum pennellii
Sp3g09850 Schrenkiella parvula
TAR633G1471 Trochodendron aralioides
Thecc.05G100700 Theobroma cacao
Thhalv10021180m.g Eutrema salsugineum
TPR.G23318 Trifolium pratense
TWI74G1155 Tripterygium wilfordii
unitig_22.g6018 Utricularia gibba
vmacro07460 Vaccinium macrocarpon
Zm00001eb362600 Zea mays

User provided reference genes

Program Settings