Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24130 Brassica napus
Aa31LG4G18660 Aethionema arabicum
Actinidia36520 Actinidia chinensis
AL5G30586 Arabidopsis lyrata
Aqoxy6G00915 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea
AT3G50430 Arabidopsis thaliana
ATR0733G107 Amborella trichopoda
ATR0733G174 Amborella trichopoda
ATR0733G226 Amborella trichopoda
Atru.chr3.446 Acer truncatum
AUR62001974 Chenopodium quinoa
AUR62003829 Chenopodium quinoa
BcaB05g23218 Brassica carinata
BcaC09g50030 Brassica carinata
BolC1t02922H Brassica oleracea
BraA01t02325Z Brassica rapa
C01p29820 Brassica napus
CAN.G836.36 Capsicum annuum
CANSAT01G2373 Cannabis sativa
CARHR159940 Cardamine hirsuta
Carub.0005s1677 Capsella rubella
Ca_22212_v3 Cicer arietinum L.
Ca_22230_v3 Cicer arietinum L.
Cc07_g05580 Coffea canephora
CDE07G0460 Ceratophyllum demersum
CDE07G1850 Ceratophyllum demersum
Cfa004216 Carpinus fangiana
Ciclev10025347m.g Citrus clementina
CiPaw.02G011900 Carya illinoinensis
ClCG02G012840 Citrullus lanatus
COL.COLO4_11329 Corchorus olitorius
Cpa.g.sc76.25 Carica papaya
CsaV3_2G016900 Cucumis sativus L.
CSS0018173 Camellia sinensis var. sinensis
CSS0022206 Camellia sinensis var. sinensis
DCAR_025691 Daucus carota
Dinv26751 Davidia involucrata
Duzib187G0300 Durio zibethinus
ECA246G1174 Erigeron canadensis
Eucgr.I01015 Eucalyptus grandis
FAN05G3710 Fragaria x ananassa
FAN08G2647 Fragaria x ananassa
FAN23G0082 Fragaria x ananassa
FAN26G3106 Fragaria x ananassa
FAN28G0437 Fragaria x ananassa
FAN28G0452 Fragaria x ananassa
FAN28G0684 Fragaria x ananassa
FAN28G1646 Fragaria x ananassa
FvH4_1g14850 Fragaria vesca
Glyma.02G062800 Glycine max
Gohir.A12G068800 Gossypium hirsutum
Gohir.D12G090400 Gossypium hirsutum
Gorai.008G072600 Gossypium raimondii
GSVIVG01002723001 Vitis vinifera
GSVIVG01036190001 Vitis vinifera
HanXRQChr12g0378291 Helianthus annuus
Haze_15195 Corylus avellana
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla
HPP92_017771 Vanilla planifolia
Hund16306 Selenicereus undatus
Lalb_Chr16g0388451 Lupinus albus
Lj4g0023849 Lotus japonicus
Lj7A17G42 Lonicera japonica
Lj7A20T60 Lonicera japonica
Lsat_1_v5_gn_3_92360 Lactuca sativa
Manes.13G130000 Manihot esculenta
Mapoly0122s0032 Marchantia polymorpha
MBI16_g19900_MAGBIO Magnolia biondii
MD06G1092100 Malus domestica
MD06G1092200 Malus domestica
MD06G1092300 Malus domestica
MD15G1276100 Malus domestica
Medtr8g079100 Medicago truncatula
MELO3C020890.2 Cucumis melo
Migut.H00483 Erythranthe guttata
Nitab4.5_0000108g0340 Nicotiana tabacum
Nitab4.5_0001014g0040 Nicotiana tabacum
Nn5g29383 Nelumbo nucifera
Oeu003945.1 Olea europaea
Os07g0120700 Oryza sativa ssp. japonica
Peaxi162Scf00993g00018 Petunia axillaris
PGR044G2727 Punica granatum
PGR119G2375 Punica granatum
PGSC0003DMG402010073 Solanum tuberosum
Phvul.003G248400 Phaseolus vulgaris
Potri.005G133500 Populus trichocarpa
Pp3c3_30590 Physcomitrium patens
Prupe.5G239300 Prunus persica
Prupe.7G141900 Prunus persica
Psat4g089520 Pisum sativum
PSO541G3044 Papaver somniferum
QL06p043714 Quercus lobata
RcHm_v2.0_Chr1g0329901 Rosa chinensis
RcHm_v2.0_Chr2g0103811 Rosa chinensis
Sabra05G0107200 Salix brachista
SalBow1G5517 Salvia bowleyana
Sc03g0001280 Simmondsia chinensis
Sed0001332 Sechium edule
SEGI_02281 Sequoiadendron giganteum
SEGI_32623 Sequoiadendron giganteum
SEGI_35306 Sequoiadendron giganteum
SEGI_38886 Sequoiadendron giganteum
SGA_v2.0_scaffold204G41611 Striga asiatica
SGA_v2.0_scaffold204G41612 Striga asiatica
Solyc02g090260.3 Solanum lycopersicum
Sopen02g034940 Solanum pennellii
Sp5g11730 Schrenkiella parvula
TAR376G1120 Trochodendron aralioides
THA.LOC104821263 Tarenaya hassleriana
Thecc.01G048300 Theobroma cacao
Thhalv10010194m.g Eutrema salsugineum
TPR.G30340 Trifolium pratense
unitig_749.g14219 Utricularia gibba
unitig_78.g29629 Utricularia gibba
vmacro05297 Vaccinium macrocarpon
VMungo0251G1647 Vigna mungo
Zm00001eb209640 Zea mays
Zm00001eb209650 Zea mays

User provided reference genes

Program Settings