Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p05540 Brassica napus
Aa31LG1G27020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis
Actinidia33456 Actinidia chinensis
Ah.07g198740 Amaranthus hybridus
AL4G44700 Arabidopsis lyrata
Aqoxy7G00540 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea
AT2G45520 Arabidopsis thaliana
ATR0757G101 Amborella trichopoda
Atru.chr5.338 Acer truncatum
AUR62004244 Chenopodium quinoa
AUR62013604 Chenopodium quinoa
BcaB06g29418 Brassica carinata
BcaC02g07085 Brassica carinata
BolC4t22271H Brassica oleracea
BraA05t19524Z Brassica rapa
CAN.G333.1 Capsicum annuum
CANSAT94G0012 Cannabis sativa
CARHR140710 Cardamine hirsuta
Carub.0004s2814 Capsella rubella
Ca_07836_v3 Cicer arietinum L.
Cc02_g36430 Coffea canephora
CDE04G1869 Ceratophyllum demersum
Cfa010232 Carpinus fangiana
Ciclev10022036m.g Citrus clementina
CiPaw.01G260000 Carya illinoinensis
ClCG06G000300 Citrullus lanatus
COL.COLO4_12585 Corchorus olitorius
Cpa.g.sc18.149 Carica papaya
CsaV3_6G006090 Cucumis sativus L.
CSS0020305 Camellia sinensis var. sinensis
Dinv32395 Davidia involucrata
Duzib133G0994 Durio zibethinus
Duzib138G0092 Durio zibethinus
Duzib138G0657 Durio zibethinus
ECA240G0119 Erigeron canadensis
EL10Ac1g00926 Beta vulgaris
Eucgr.E01355 Eucalyptus grandis
Eucgr.E01357 Eucalyptus grandis
FAN01G2432 Fragaria x ananassa
FAN03G1779 Fragaria x ananassa
FAN06G2821 Fragaria x ananassa
FAN06G3889 Fragaria x ananassa
FAN10G0264 Fragaria x ananassa
FAN10G2097 Fragaria x ananassa
FvH4_7g12340 Fragaria vesca
Glyma.09G267200 Glycine max
Gohir.A11G082800 Gossypium hirsutum
Gohir.D11G086900 Gossypium hirsutum
Gorai.007G092800 Gossypium raimondii
GSVIVG01027546001 Vitis vinifera
HanXRQChr03g0093671 Helianthus annuus
HanXRQChr14g0444521 Helianthus annuus
Haze_16738 Corylus avellana
Haze_16739 Corylus avellana
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla
HPP92_020257 Vanilla planifolia
Hund17005 Selenicereus undatus
Lalb_Chr03g0039091 Lupinus albus
LjContig00136g0018410 Lotus japonicus
Lsat_1_v5_gn_3_135520 Lactuca sativa
Lsat_1_v5_gn_8_32340 Lactuca sativa
Manes.05G043400 Manihot esculenta
Manes.12G048300 Manihot esculenta
Manes.12G048301 Manihot esculenta
Manes.12G053501 Manihot esculenta
Mapoly0084s0081 Marchantia polymorpha
MBI12_g38018_MAGBIO Magnolia biondii
MD02G1199700 Malus domestica
Medtr7g075640 Medicago truncatula
MELO3C022508.2 Cucumis melo
Migut.N01586 Erythranthe guttata
MSTRG.4882 Avicennia marina
Nitab4.5_0001702g0200 Nicotiana tabacum
Nitab4.5_0010110g0010 Nicotiana tabacum
Nn6g34351 Nelumbo nucifera
Oeu036610.1 Olea europaea
Os06g0121600 Oryza sativa ssp. japonica
Os06g0129800 Oryza sativa ssp. japonica
Peaxi162Scf00207g00165 Petunia axillaris
PGR042G1390 Punica granatum
PGSC0003DMG400021635 Solanum tuberosum
Phvul.008G074700 Phaseolus vulgaris
Potri.014G072400 Populus trichocarpa
Pp3c22_10350 Physcomitrium patens
Prupe.2G148900 Prunus persica
Psat3g104080 Pisum sativum
PSO478G1842 Papaver somniferum
PSO782G3084 Papaver somniferum
QL08p051764 Quercus lobata
RcHm_v2.0_Chr1g0351131 Rosa chinensis
Rhsim01G0161500 Rhododendron simsii
SalBow5G0966 Salvia bowleyana
SalBow5G5079 Salvia bowleyana
Sc02g0002410 Simmondsia chinensis
Sed0022399 Sechium edule
SEGI_35511 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05605 Striga asiatica
SGA_v2.0_scaffold43G16466 Striga asiatica
SMO143G0152 Selaginella moellendorffii
SMO347G0023 Selaginella moellendorffii
Solyc05g048750.3 Solanum lycopersicum
Sopen05g028070 Solanum pennellii
Sp4g27550 Schrenkiella parvula
TAR636G0929 Trochodendron aralioides
THA.LOC104801995 Tarenaya hassleriana
Thecc.01G373000 Theobroma cacao
Thhalv10001611m.g Eutrema salsugineum
TPR.G37765 Trifolium pratense
TWI23G1019 Tripterygium wilfordii
TWI59G0969 Tripterygium wilfordii
unitig_578.g16483 Utricularia gibba
vmacro20994 Vaccinium macrocarpon
vmacro20995 Vaccinium macrocarpon
VMungo1383G3715 Vigna mungo
Zm00001eb269540 Zea mays
Zm00001eb378390 Zea mays

User provided reference genes

Program Settings