Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34950 Brassica napus
A05p41250 Brassica napus
Ah.08g214570 Amaranthus hybridus
AL3G18020 Arabidopsis lyrata
Aqoxy2G02951 Aquilegia oxysepala
AT3G06890 Arabidopsis thaliana
ATR0796G044 Amborella trichopoda
Atru.chr4.2870 Acer truncatum
AUR62040379 Chenopodium quinoa
BcaC05g29822 Brassica carinata
BolC3t16523H Brassica oleracea
BolC5t34701H Brassica oleracea
BraA03t12675Z Brassica rapa
BraA05t22848Z Brassica rapa
C03p42530 Brassica napus
CAN.G129.31 Capsicum annuum
CAN.G484.39 Capsicum annuum
CANSAT78G1139 Cannabis sativa
CARHR081510 Cardamine hirsuta
Carub.0003s0642 Capsella rubella
Ca_21488_v3 Cicer arietinum L.
Cc03_g01760 Coffea canephora
Ciclev10006049m.g Citrus clementina
CiPaw.01G147500 Carya illinoinensis
CiPaw.02G082300 Carya illinoinensis
ClCG00G005610 Citrullus lanatus
Cpa.g.sc16.184 Carica papaya
CSS0010580 Camellia sinensis var. sinensis
CSS0014864 Camellia sinensis var. sinensis
DCAR_002469 Daucus carota
DCAR_027070 Daucus carota
DCAR_030521 Daucus carota
Dinv29759 Davidia involucrata
Duzib151G0306 Durio zibethinus
Duzib212G0294 Durio zibethinus
ECA240G4018 Erigeron canadensis
Eucgr.H03932 Eucalyptus grandis
FAN07G2082 Fragaria x ananassa
FAN12G3601 Fragaria x ananassa
FAN12G3976 Fragaria x ananassa
FAN17G1034 Fragaria x ananassa
FvH4_4g18340 Fragaria vesca
Glyma.07G246700 Glycine max
Gohir.A09G238300 Gossypium hirsutum
Gohir.A10G164900 Gossypium hirsutum
Gohir.D09G239200 Gossypium hirsutum
Gohir.D10G171100 Gossypium hirsutum
Gorai.006G261900 Gossypium raimondii
Gorai.011G191100 Gossypium raimondii
HanXRQChr03g0089341 Helianthus annuus
HanXRQChr13g0419971 Helianthus annuus
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla
HPP92_000110 Vanilla planifolia
Lalb_Chr07g0177791 Lupinus albus
Lalb_Chr13g0303561 Lupinus albus
Lj4g0016566 Lotus japonicus
Lsat_1_v5_gn_6_95660 Lactuca sativa
Manes.03G196700 Manihot esculenta
Manes.15G011600 Manihot esculenta
MBI18_g06870_MAGBIO Magnolia biondii
MBI19_g25353_MAGBIO Magnolia biondii
MD13G1167200 Malus domestica
MD16G1168200 Malus domestica
Medtr4g120020 Medicago truncatula
MELO3C006671.2 Cucumis melo
Migut.G00148 Erythranthe guttata
MSTRG.3906 Avicennia marina
Nitab4.5_0002761g0070 Nicotiana tabacum
Nitab4.5_0003466g0010 Nicotiana tabacum
Nn3g21479 Nelumbo nucifera
Nn4g25792 Nelumbo nucifera
Oeu001107.1 Olea europaea
Oeu057714.1 Olea europaea
Oeu063359.1 Olea europaea
Os03g0343800 Oryza sativa ssp. japonica
Os07g0673801 Oryza sativa ssp. japonica
Peaxi162Scf00246g00103 Petunia axillaris
Peaxi162Scf00646g00027 Petunia axillaris
PGR004G0310 Punica granatum
PGR031G3343 Punica granatum
PGSC0003DMG400004705 Solanum tuberosum
PGSC0003DMG400011317 Solanum tuberosum
Phvul.003G097003 Phaseolus vulgaris
Potri.008G221000 Populus trichocarpa
Potri.010G013100 Populus trichocarpa
Prupe.1G134500 Prunus persica
Psat4g026840 Pisum sativum
PSO017G4993 Papaver somniferum
PSO170G5007 Papaver somniferum
PSO210G6323 Papaver somniferum
PSO832G1781 Papaver somniferum
QL06p009590 Quercus lobata
RcHm_v2.0_Chr4g0422811 Rosa chinensis
Rhsim04G0223700 Rhododendron simsii
Rhsim09G0007300 Rhododendron simsii
Sabra10G0008200 Salix brachista
Sabra10G0008300 Salix brachista
SalBow5G0837 Salvia bowleyana
Sc19g0005290 Simmondsia chinensis
Sc19g0005370 Simmondsia chinensis
Sed0015603 Sechium edule
SGA_v2.0_scaffold67G22622 Striga asiatica
Solyc12g099500.2 Solanum lycopersicum
Sopen01g028370 Solanum pennellii
Sopen12g034170 Solanum pennellii
Sp3g05850 Schrenkiella parvula
TAR370G0002 Trochodendron aralioides
TAR633G0386 Trochodendron aralioides
THA.LOC104818922 Tarenaya hassleriana
Thecc.04G286300 Theobroma cacao
Thecc.05G268700 Theobroma cacao
Thecc.09G272700 Theobroma cacao
Thhalv10021931m.g Eutrema salsugineum
TPR.G3164 Trifolium pratense
TWI09G0327 Tripterygium wilfordii
unitig_32.g11869 Utricularia gibba
VMungo1215G2846 Vigna mungo
Zm00001eb016470 Zea mays
Zm00001eb124100 Zea mays
Zm00001eb394930 Zea mays

User provided reference genes

Program Settings