Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p45110 Brassica napus
Aa31sc151G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis
Actinidia10841 Actinidia chinensis
Actinidia26803 Actinidia chinensis
Ah.12g054330 Amaranthus hybridus
AL8G10640 Arabidopsis lyrata
Aqoxy7G00821 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea
AT5G47400 Arabidopsis thaliana
ATR0057G118 Amborella trichopoda
Atru.chr9.1276 Acer truncatum
AUR62007111 Chenopodium quinoa
AUR62019973 Chenopodium quinoa
BcaC06g31390 Brassica carinata
BcaC06g31392 Brassica carinata
BcaC06g34255 Brassica carinata
BcaC06g34257 Brassica carinata
BolC7t43648H Brassica oleracea
BraA06t27381Z Brassica rapa
C07p31040 Brassica napus
CAN.G1178.20 Capsicum annuum
CAN.G1178.24 Capsicum annuum
CAN.G26.36 Capsicum annuum
CANSAT21G0792 Cannabis sativa
CARHR173970 Cardamine hirsuta
Carub.0008s0038 Capsella rubella
Ca_21980_v3 Cicer arietinum L.
Cc08_g12180 Coffea canephora
CDE11G0086 Ceratophyllum demersum
Cfa012688 Carpinus fangiana
Ciclev10018892m.g Citrus clementina
CiPaw.12G050300 Carya illinoinensis
COL.COLO4_37128 Corchorus olitorius
Cpa.g.sc3684.1 Carica papaya
Cre06.g278126 Chlamydomonas reinhardtii
CSS0006614 Camellia sinensis var. sinensis
CSS0025591 Camellia sinensis var. sinensis
DCAR_004972 Daucus carota
DCAR_004974 Daucus carota
DCAR_004979 Daucus carota
DCAR_004983 Daucus carota
DCAR_004984 Daucus carota
DCAR_004986 Daucus carota
DCAR_004989 Daucus carota
Dinv21656 Davidia involucrata
Duzib068G0477 Durio zibethinus
Duzib205G2017 Durio zibethinus
ECA233G4789 Erigeron canadensis
ECA233G6125 Erigeron canadensis
EL10Ac5g12357 Beta vulgaris
Eucgr.D02100 Eucalyptus grandis
FAN04G1892 Fragaria x ananassa
FAN08G3018 Fragaria x ananassa
FAN13G0013 Fragaria x ananassa
FAN18G1193 Fragaria x ananassa
FvH4_5g19410 Fragaria vesca
Glyma.05G062000 Glycine max
Glyma.17G143800 Glycine max
Gohir.A12G215500 Gossypium hirsutum
Gohir.D12G218100 Gossypium hirsutum
Gorai.008G233700 Gossypium raimondii
GSVIVG01006275001 Vitis vinifera
GSVIVG01006276001 Vitis vinifera
HanXRQChr08g0227751 Helianthus annuus
HanXRQChr16g0501081 Helianthus annuus
Haze_07944 Corylus avellana
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla
HPP92_022463 Vanilla planifolia
Hund14577 Selenicereus undatus
Lalb_Chr05g0221161 Lupinus albus
Lj2C223G6 Lonicera japonica
Lj4g0000262 Lotus japonicus
Lsat_1_v5_gn_6_18041 Lactuca sativa
Manes.01G083200 Manihot esculenta
Manes.02G041400 Manihot esculenta
MCO13G224 Micromonas commoda
MD04G1060300 Malus domestica
MD06G1053300 Malus domestica
Medtr4g100700 Medicago truncatula
Migut.A01134 Erythranthe guttata
MSTRG.12123 Avicennia marina
Nitab4.5_0001381g0100 Nicotiana tabacum
Nitab4.5_0002289g0120 Nicotiana tabacum
Nn6g33880 Nelumbo nucifera
Oeu017057.2 Olea europaea
Os10g0560500 Oryza sativa ssp. japonica
Peaxi162Scf00209g00130 Petunia axillaris
PGR031G0681 Punica granatum
Phvul.003G222500 Phaseolus vulgaris
Potri.001G155800 Populus trichocarpa
Pp3c19_23280 Physcomitrium patens
Prupe.5G065400 Prunus persica
Psat4g072920 Pisum sativum
QL12p011426 Quercus lobata
RcHm_v2.0_Chr7g0203921 Rosa chinensis
Rhsim07G0110800 Rhododendron simsii
Rhsim07G0111300 Rhododendron simsii
Sabra01G0125500 Salix brachista
SalBow6G5281 Salvia bowleyana
Sc22g0000980 Simmondsia chinensis
SGA_v2.0_scaffold104G30177 Striga asiatica
Solyc08g078440.3 Solanum lycopersicum
Sopen08g026930 Solanum pennellii
Sp2g12115 Schrenkiella parvula
TAR365G0661 Trochodendron aralioides
TAR374G0600 Trochodendron aralioides
TAR629G1120 Trochodendron aralioides
TAR633G2042 Trochodendron aralioides
THA.LOC104806670 Tarenaya hassleriana
Thecc.03G248200 Theobroma cacao
Thhalv10000783m.g Eutrema salsugineum
TPR.G36090 Trifolium pratense
TPR.G37689 Trifolium pratense
TWI60G0317 Tripterygium wilfordii
unitig_21.g20314 Utricularia gibba
vmacro14066 Vaccinium macrocarpon
VMungo0251G0668 Vigna mungo
Zm00001eb000330 Zea mays

User provided reference genes

Program Settings