Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p12490 Brassica napus
Aa31LG8G16640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2743 Anthoceros agrestis
Actinidia22101 Actinidia chinensis
Actinidia30570 Actinidia chinensis
Ah.05g173360 Amaranthus hybridus
AL3G48590 Arabidopsis lyrata
Aqoxy5G02914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HTSI62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P1HIL5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QI9TW4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZW62G6 Arachis hypogaea
AT2G19640 Arabidopsis thaliana
ATR0582G160 Amborella trichopoda
ATR0594G148 Amborella trichopoda
ATR0759G085 Amborella trichopoda
ATR1159G049 Amborella trichopoda
Atru.chr12.1483 Acer truncatum
AUR62004124 Chenopodium quinoa
AUR62013717 Chenopodium quinoa
BcaB01g01338 Brassica carinata
BcaC04g22837 Brassica carinata
BolC9t54380H Brassica oleracea
BraA09t36893Z Brassica rapa
C09p14800 Brassica napus
CAN.G793.53 Capsicum annuum
CARHR110080 Cardamine hirsuta
CARHR237330 Cardamine hirsuta
Carub.0003s3394 Capsella rubella
Ca_18201_v3 Cicer arietinum L.
Ca_25111_v3 Cicer arietinum L.
CBR_g8931 Chara braunii
Cc03_g11070 Coffea canephora
CDE02G2773 Ceratophyllum demersum
Ciclev10028653m.g Citrus clementina
CiPaw.05G097000 Carya illinoinensis
COL.COLO4_34640 Corchorus olitorius
Cpa.g.sc38.24 Carica papaya
Cre06.g299850 Chlamydomonas reinhardtii
CSS0030693 Camellia sinensis var. sinensis
DCAR_030439 Daucus carota
Dinv29754 Davidia involucrata
Duzib151G0613 Durio zibethinus
ECA246G2067 Erigeron canadensis
EL10Ac1g00795 Beta vulgaris
EL10Ac1g00801 Beta vulgaris
Eucgr.J01690 Eucalyptus grandis
Eucgr.J01694 Eucalyptus grandis
FAN07G2695 Fragaria x ananassa
FAN12G2690 Fragaria x ananassa
FAN12G3771 Fragaria x ananassa
FvH4_4g22020 Fragaria vesca
Glyma.01G148700 Glycine max
Glyma.05G136500 Glycine max
Glyma.08G091700 Glycine max
Gohir.A09G235100 Gossypium hirsutum
Gohir.D09G235900 Gossypium hirsutum
Gorai.006G259000 Gossypium raimondii
GSVIVG01001133001 Vitis vinifera
HanXRQChr06g0175351 Helianthus annuus
Haze_12539 Corylus avellana
Hma1.2p1_0738F.1_g211070 Hydrangea macrophylla
HPP92_003450 Vanilla planifolia
Hund17075 Selenicereus undatus
Lalb_Chr05g0215481 Lupinus albus
Lalb_Chr13g0293391 Lupinus albus
Lj3P1076T29 Lonicera japonica
Lj4g0022593 Lotus japonicus
Lsat_1_v5_gn_3_33341 Lactuca sativa
Manes.10G153800 Manihot esculenta
MBI07_g11065_MAGBIO Magnolia biondii
MCO13G074 Micromonas commoda
MD11G1163300 Malus domestica
MD13G1134900 Malus domestica
MD16G1130700 Malus domestica
Medtr1g038390 Medicago truncatula
Medtr5g027020 Medicago truncatula
Migut.I00849 Erythranthe guttata
MSTRG.22700 Avicennia marina
Nitab4.5_0011884g0020 Nicotiana tabacum
Nn4g22041 Nelumbo nucifera
Os08g0205300 Oryza sativa ssp. japonica
PGR119G0473 Punica granatum
PGSC0003DMG400017176 Solanum tuberosum
Phvul.002G185500 Phaseolus vulgaris
Potri.001G071700 Populus trichocarpa
Pp3c15_12800 Physcomitrium patens
PRCOL_00003758 Prasinoderma coloniale
Prupe.1G210500 Prunus persica
Psat2g141600 Pisum sativum
Psat2g141640 Pisum sativum
Psat6g087440 Pisum sativum
Psat7g086000 Pisum sativum
PSO675G2922 Papaver somniferum
QL02p002326 Quercus lobata
RcHm_v2.0_Chr4g0427831 Rosa chinensis
RcHm_v2.0_Chr4g0428221 Rosa chinensis
Rhsim01G0183300 Rhododendron simsii
Sabra01G0050400 Salix brachista
SalBow2G2533 Salvia bowleyana
Sc02g0002970 Simmondsia chinensis
SEGI_08209 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14814 Striga asiatica
SMO117G0166 Selaginella moellendorffii
Solyc04g051187.1 Solanum lycopersicum
Solyc09g090030.2 Solanum lycopersicum
Sopen09g032940 Solanum pennellii
Sp3g33010 Schrenkiella parvula
TAR371G1163 Trochodendron aralioides
TAR371G1265 Trochodendron aralioides
THA.LOC104820538 Tarenaya hassleriana
Thecc.04G298100 Theobroma cacao
Thhalv10002010m.g Eutrema salsugineum
TPR.G11866 Trifolium pratense
TPR.G29135 Trifolium pratense
TWI36G0954 Tripterygium wilfordii
unitig_744.g24339 Utricularia gibba
VMungo0251G3148 Vigna mungo
VMungo1215G0951 Vigna mungo
Zm00001eb413710 Zea mays

User provided reference genes

Program Settings