Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p01430 Brassica napus
Aa31LG10G1550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis
Actinidia21851 Actinidia chinensis
Actinidia21852 Actinidia chinensis
Actinidia24409 Actinidia chinensis
Actinidia33812 Actinidia chinensis
Ah.08g217540 Amaranthus hybridus
AL1G62410 Arabidopsis lyrata
Aqoxy2G04033 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea
AT1G53710 Arabidopsis thaliana
ATR0006G018 Amborella trichopoda
ATR0006G056 Amborella trichopoda
Atru.chr1.4182 Acer truncatum
AUR62001377 Chenopodium quinoa
AUR62044064 Chenopodium quinoa
BcaB04g17063 Brassica carinata
BcaC01g01410 Brassica carinata
BcaC09g48416 Brassica carinata
BcaNung02916 Brassica carinata
BolC3t21495H Brassica oleracea
BraA08t32194Z Brassica rapa
C03p91740 Brassica napus
CAN.G390.42 Capsicum annuum
CANSAT56G3116 Cannabis sativa
CARHR044010 Cardamine hirsuta
Carub.0001s4299 Capsella rubella
Ca_23471_v3 Cicer arietinum L.
Cc04_g00530 Coffea canephora
CDE06G0010 Ceratophyllum demersum
Ciclev10025368m.g Citrus clementina
CiPaw.03G010100 Carya illinoinensis
COL.COLO4_26801 Corchorus olitorius
Cpa.g.sc229.10 Carica papaya
CSS0027715 Camellia sinensis var. sinensis
CSS0038482 Camellia sinensis var. sinensis
DCAR_007665 Daucus carota
Dinv20369 Davidia involucrata
Duzib160G0342 Durio zibethinus
ECA234G0268 Erigeron canadensis
EL10Ac7g18235 Beta vulgaris
Eucgr.I02172 Eucalyptus grandis
FAN02G1271 Fragaria x ananassa
FAN05G4676 Fragaria x ananassa
FAN09G2187 Fragaria x ananassa
FAN14G1234 Fragaria x ananassa
FAN14G2634 Fragaria x ananassa
FvH4_6g36250 Fragaria vesca
Glyma.07G047100 Glycine max
Glyma.16G015100 Glycine max
Gohir.A13G116750 Gossypium hirsutum
Gohir.A13G116801 Gossypium hirsutum
Gohir.D13G119900 Gossypium hirsutum
Gorai.013G134300 Gossypium raimondii
GSVIVG01026409001 Vitis vinifera
HanXRQChr10g0311581 Helianthus annuus
Haze_14039 Corylus avellana
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla
HPP92_002242 Vanilla planifolia
Hund05690 Selenicereus undatus
Lalb_Chr10g0101031 Lupinus albus
Lj3g0013980 Lotus japonicus
Lj5C27T5 Lonicera japonica
Lsat_1_v5_gn_1_119700 Lactuca sativa
Lsat_1_v5_gn_2_122021 Lactuca sativa
Lsat_1_v5_gn_2_91241 Lactuca sativa
Lsat_1_v5_gn_5_137600 Lactuca sativa
Manes.11G010600 Manihot esculenta
Mapoly0048s0109 Marchantia polymorpha
MBI13_g05970_MAGBIO Magnolia biondii
MCO09G741 Micromonas commoda
MD09G1171100 Malus domestica
MD17G1156100 Malus domestica
Medtr8g023620 Medicago truncatula
Migut.D00903 Erythranthe guttata
MSTRG.9549 Avicennia marina
Nitab4.5_0000357g0220 Nicotiana tabacum
Nitab4.5_0003469g0010 Nicotiana tabacum
Nn8g41287 Nelumbo nucifera
Oeu006761.2 Olea europaea
Os03g0397300 Oryza sativa ssp. japonica
Peaxi162Scf00177g00616 Petunia axillaris
PGR119G0898 Punica granatum
PGSC0003DMG401028844 Solanum tuberosum
PGSC0003DMG402028844 Solanum tuberosum
Phvul.010G121800 Phaseolus vulgaris
Potri.001G161100 Populus trichocarpa
Pp3c21_8010 Physcomitrium patens
Prupe.3G029600 Prunus persica
Psat4g165440 Pisum sativum
PSO017G0187 Papaver somniferum
PSO170G0973 Papaver somniferum
QL03p047059 Quercus lobata
QL03p047068 Quercus lobata
RcHm_v2.0_Chr2g0148251 Rosa chinensis
Rhsim08G0246200 Rhododendron simsii
Sabra01G0131200 Salix brachista
SalBow7G2314 Salvia bowleyana
Sc12g0010960 Simmondsia chinensis
SEGI_04788 Sequoiadendron giganteum
SEGI_35568 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02101 Striga asiatica
SMO347G0345 Selaginella moellendorffii
Solyc12g055740.2 Solanum lycopersicum
Sopen12g024210 Solanum pennellii
Sp1g40250 Schrenkiella parvula
TAR623G0926 Trochodendron aralioides
THA.LOC104803433 Tarenaya hassleriana
THA.LOC104822767 Tarenaya hassleriana
Thecc.06G048900 Theobroma cacao
Thhalv10011378m.g Eutrema salsugineum
TPR.G26443 Trifolium pratense
TWI59G0357 Tripterygium wilfordii
unitig_699.g19656 Utricularia gibba
vmacro18708 Vaccinium macrocarpon
VMungo0331G0057 Vigna mungo
Zm00001eb392730 Zea mays

User provided reference genes

Program Settings