Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p20930 Brassica napus
Aa31LG5G3090 Aethionema arabicum
Actinidia10993 Actinidia chinensis
Actinidia11116 Actinidia chinensis
Ah.01g015540 Amaranthus hybridus
AL8G15870 Arabidopsis lyrata
Aqoxy1G02297 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea
AT5G44150 Arabidopsis thaliana
ATR0602G055 Amborella trichopoda
ATR0602G285 Amborella trichopoda
Atru.chr6.2861 Acer truncatum
AUR62036068 Chenopodium quinoa
AUR62043432 Chenopodium quinoa
BcaB07g30967 Brassica carinata
BcaC04g21859 Brassica carinata
BcaC04g21861 Brassica carinata
BcaC06g31649 Brassica carinata
BolC9t55549H Brassica oleracea
BraA09t37693Z Brassica rapa
C09p26530 Brassica napus
CAN.G1808.7 Capsicum annuum
CANSAT54G0862 Cannabis sativa
CARHR179120 Cardamine hirsuta
Carub.0008s0437 Capsella rubella
Ca_18916_v3 Cicer arietinum L.
Cc05_g07800 Coffea canephora
CDE10G0527 Ceratophyllum demersum
CDE10G0622 Ceratophyllum demersum
Cfa014669 Carpinus fangiana
Ciclev10015198m.g Citrus clementina
CiPaw.03G182600 Carya illinoinensis
ClCG00G003780 Citrullus lanatus
ClCG02G002300 Citrullus lanatus
ClCG03G006150 Citrullus lanatus
COL.COLO4_07343 Corchorus olitorius
Cpa.g.sc165.1 Carica papaya
CsaV3_7G003140 Cucumis sativus L.
CSS0015867 Camellia sinensis var. sinensis
CSS0027561 Camellia sinensis var. sinensis
CSS0030364 Camellia sinensis var. sinensis
CSS0037366 Camellia sinensis var. sinensis
DCAR_009761 Daucus carota
Dinv06849 Davidia involucrata
Duzib132G0616 Durio zibethinus
Duzib248G1400 Durio zibethinus
ECA232G0319 Erigeron canadensis
EL10Ac9g20828 Beta vulgaris
Eucgr.K01063 Eucalyptus grandis
FAN08G3049 Fragaria x ananassa
FAN13G2061 Fragaria x ananassa
FAN18G2410 Fragaria x ananassa
FvH4_5g30510 Fragaria vesca
Glyma.06G287100 Glycine max
Glyma.12G119000 Glycine max
Gohir.A08G243900 Gossypium hirsutum
Gohir.D08G264800 Gossypium hirsutum
Gorai.004G282700 Gossypium raimondii
GSVIVG01020613001 Vitis vinifera
HanXRQChr17g0555041 Helianthus annuus
Haze_13261 Corylus avellana
Haze_13262 Corylus avellana
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla
HPP92_023281 Vanilla planifolia
Hund01006 Selenicereus undatus
Lalb_Chr03g0029681 Lupinus albus
Lj3g0004052 Lotus japonicus
Lsat_1_v5_gn_8_69500 Lactuca sativa
Manes.12G086300 Manihot esculenta
Mapoly0050s0110 Marchantia polymorpha
MBI06_g42697_MAGBIO Magnolia biondii
MD15G1126800 Malus domestica
Medtr4g079100 Medicago truncatula
MELO3C018863.2 Cucumis melo
Migut.M00152 Erythranthe guttata
MSTRG.5024 Avicennia marina
Nitab4.5_0000621g0040 Nicotiana tabacum
Nitab4.5_0006091g0020 Nicotiana tabacum
Nn1g06398 Nelumbo nucifera
Oeu016899.1 Olea europaea
Oeu036086.1 Olea europaea
Os05g0564000 Oryza sativa ssp. japonica
Peaxi162Scf00189g00018 Petunia axillaris
PGR142G0029 Punica granatum
PGSC0003DMG400009383 Solanum tuberosum
Phvul.010G089800 Phaseolus vulgaris
Potri.017G017200 Populus trichocarpa
Prupe.2G094200 Prunus persica
Psat7g136840 Pisum sativum
PSO541G3384 Papaver somniferum
PSO675G8266 Papaver somniferum
QL08p040692 Quercus lobata
RcHm_v2.0_Chr7g0225261 Rosa chinensis
RcHm_v2.0_Chr7g0225321 Rosa chinensis
Rhsim06G0136200 Rhododendron simsii
Sabra07G0109400 Salix brachista
Sabra17G0013400 Salix brachista
SalBow7G4646 Salvia bowleyana
Sc12g0003270 Simmondsia chinensis
Sed0009608 Sechium edule
Sed0015399 Sechium edule
SEGI_30235 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20553 Striga asiatica
SGA_v2.0_scaffold70G23480 Striga asiatica
SMO200G0203 Selaginella moellendorffii
Solyc07g053560.3 Solanum lycopersicum
Sopen07g027510 Solanum pennellii
Sp2g08980 Schrenkiella parvula
TAR626G0721 Trochodendron aralioides
TAR627G0647 Trochodendron aralioides
THA.LOC104801157 Tarenaya hassleriana
Thecc.02G187500 Theobroma cacao
Thhalv10003234m.g Eutrema salsugineum
TPR.G14253 Trifolium pratense
TWI59G1373 Tripterygium wilfordii
unitig_46.g18247 Utricularia gibba
vmacro12351 Vaccinium macrocarpon
VMungo0037G0001 Vigna mungo
Zm00001eb295870 Zea mays

User provided reference genes

Program Settings