Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p20170 Brassica napus
Aa31LG5G9740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2052 Anthoceros agrestis
Actinidia01201 Actinidia chinensis
AL4G18030 Arabidopsis lyrata
Aqoxy6G02410 Aquilegia oxysepala
Aqoxy7G01325 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.D8M0X1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K04B1Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KA607S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5Q5WD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XSX4PG Arachis hypogaea
AT2G25950 Arabidopsis thaliana
ATR0789G168 Amborella trichopoda
Atru.chr7.2017 Acer truncatum
AUR62009178 Chenopodium quinoa
AUR62022048 Chenopodium quinoa
BcaB06g29613 Brassica carinata
BcaC02g08315 Brassica carinata
BolC4t27119H Brassica oleracea
BraA04t17597Z Brassica rapa
C04p55870 Brassica napus
CAN.G6.20 Capsicum annuum
CANSAT25G1095 Cannabis sativa
CANSAT25G2346 Cannabis sativa
CANSAT78G0664 Cannabis sativa
CARHR287330 Cardamine hirsuta
Carub.0004s0581 Capsella rubella
Ca_00502_v3 Cicer arietinum L.
CBR_g22258 Chara braunii
Cc08_g10380 Coffea canephora
CDE07G0448 Ceratophyllum demersum
Cfa017936 Carpinus fangiana
Cfa026513 Carpinus fangiana
Ciclev10009515m.g Citrus clementina
CiPaw.16G029900 Carya illinoinensis
ClCG08G016930 Citrullus lanatus
COL.COLO4_21031 Corchorus olitorius
Cpa.g.sc7.195 Carica papaya
Cre02.g110450 Chlamydomonas reinhardtii
CsaV3_2G025680 Cucumis sativus L.
CSS0024744 Camellia sinensis var. sinensis
DCAR_003069 Daucus carota
Duzib187G1697 Durio zibethinus
ECA233G6145 Erigeron canadensis
EL10Ac2g03924 Beta vulgaris
Eucgr.H03073 Eucalyptus grandis
FAN15G2916 Fragaria x ananassa
FAN20G2753 Fragaria x ananassa
FAN24G0958 Fragaria x ananassa
FAN27G1843 Fragaria x ananassa
FvH4_2g32150 Fragaria vesca
Glyma.13G222200 Glycine max
Gohir.A06G090000 Gossypium hirsutum
Gohir.D06G089000 Gossypium hirsutum
Gorai.010G102800 Gossypium raimondii
GSVIVG01035347001 Vitis vinifera
HanXRQChr09g0251201 Helianthus annuus
Haze_18212 Corylus avellana
Hma1.2p1_0450F.1_g155690 Hydrangea macrophylla
Hma1.2p1_2451F.1_g322380 Hydrangea macrophylla
HPP92_005507 Vanilla planifolia
Hund03354 Selenicereus undatus
Lalb_Chr18g0055101 Lupinus albus
Lj4g0006609 Lotus japonicus
Lj8A552G6 Lonicera japonica
Lsat_1_v5_gn_6_13140 Lactuca sativa
Manes.16G078200 Manihot esculenta
Mapoly0027s0002 Marchantia polymorpha
MCO14G523 Micromonas commoda
MD08G1044700 Malus domestica
MD08G1045300 Malus domestica
Medtr2g018310 Medicago truncatula
MELO3C030341.2 Cucumis melo
Migut.A00149 Erythranthe guttata
MSTRG.11669 Avicennia marina
Nitab4.5_0000359g0060 Nicotiana tabacum
Nitab4.5_0001179g0020 Nicotiana tabacum
Nitab4.5_0004055g0120 Nicotiana tabacum
Nn6g35396 Nelumbo nucifera
Oeu036347.1 Olea europaea
Os01g0559000 Oryza sativa ssp. japonica
Peaxi162Scf00436g00823 Petunia axillaris
PGR031G2394 Punica granatum
PGSC0003DMG400002199 Solanum tuberosum
Phvul.006G168200 Phaseolus vulgaris
Potri.018G056100 Populus trichocarpa
Pp3c22_18330 Physcomitrium patens
PRCOL_00000611 Prasinoderma coloniale
Prupe.1G326300 Prunus persica
Prupe.1G414600 Prunus persica
Psat1g192360 Pisum sativum
PSO063G2325 Papaver somniferum
PSO832G3146 Papaver somniferum
QL02p001525 Quercus lobata
QL02p001540 Quercus lobata
RcHm_v2.0_Chr6g0310531 Rosa chinensis
Rhsim11G0046400 Rhododendron simsii
Sabra06G0180400 Salix brachista
Sabra06G0180500 Salix brachista
Sabra06G0181100 Salix brachista
SalBow4G0568 Salvia bowleyana
Sc23g0005520 Simmondsia chinensis
Sed0008959 Sechium edule
SEGI_00170 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27220 Striga asiatica
SMO169G0297 Selaginella moellendorffii
Solyc08g065640.3 Solanum lycopersicum
Sopen08g019360 Solanum pennellii
Sp4g05860 Schrenkiella parvula
TAR383G0029 Trochodendron aralioides
THA.LOC104803733 Tarenaya hassleriana
Thecc.09G051500 Theobroma cacao
Thhalv10002098m.g Eutrema salsugineum
TPR.G20633 Trifolium pratense
TWI34G0500 Tripterygium wilfordii
unitig_748.g7518 Utricularia gibba
vmacro00160 Vaccinium macrocarpon
VMungo0540G1431 Vigna mungo
Zm00001eb162230 Zea mays

User provided reference genes

Program Settings