Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia08706 Actinidia chinensis
Actinidia34275 Actinidia chinensis
Ah.07g204540 Amaranthus hybridus
Ah.13g070870 Amaranthus hybridus
Aqoxy5G04358 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea
ATR0579G071 Amborella trichopoda
Atru.chr12.2479 Acer truncatum
Atru.chr12.2480 Acer truncatum
AUR62005972 Chenopodium quinoa
AUR62028098 Chenopodium quinoa
CAN.G303.40 Capsicum annuum
CANSAT21G0900 Cannabis sativa
Ca_16789_v3 Cicer arietinum L.
Ca_16805_v3 Cicer arietinum L.
Cc00_g14340 Coffea canephora
Cc07_g20200 Coffea canephora
CDE02G0079 Ceratophyllum demersum
CDE04G2546 Ceratophyllum demersum
Cfa016147 Carpinus fangiana
Ciclev10018632m.g Citrus clementina
CiPaw.05G206100 Carya illinoinensis
CiPaw.06G039800 Carya illinoinensis
CiPaw.06G040100 Carya illinoinensis
COL.COLO4_14382 Corchorus olitorius
Cpa.g.sc3.164 Carica papaya
Cpa.g.sc9.388 Carica papaya
CsaV3_4G008600 Cucumis sativus L.
CSS0010102 Camellia sinensis var. sinensis
DCAR_008990 Daucus carota
DCAR_020382 Daucus carota
Dinv17292 Davidia involucrata
Dinv29204 Davidia involucrata
Duzib068G0081 Durio zibethinus
Duzib084G0166 Durio zibethinus
Duzib205G0597 Durio zibethinus
ECA233G2144 Erigeron canadensis
EL10Ac3g05155 Beta vulgaris
Eucgr.A00967 Eucalyptus grandis
Eucgr.K00044 Eucalyptus grandis
Eucgr.K00452 Eucalyptus grandis
FAN01G2018 Fragaria x ananassa
FAN03G1526 Fragaria x ananassa
FAN10G1617 Fragaria x ananassa
FAN10G2847 Fragaria x ananassa
FvH4_7g33030 Fragaria vesca
Glyma.04G227100 Glycine max
Glyma.06G138000 Glycine max
Gohir.A08G105800 Gossypium hirsutum
Gohir.D08G117100 Gossypium hirsutum
Gorai.004G125800 Gossypium raimondii
GSVIVG01038660001 Vitis vinifera
HanXRQChr08g0226001 Helianthus annuus
Haze_00307 Corylus avellana
HPP92_003258 Vanilla planifolia
Hund23980 Selenicereus undatus
Lalb_Chr11g0067471 Lupinus albus
Lalb_Chr23g0272001 Lupinus albus
Lj1A1029T62 Lonicera japonica
Lj1g0002697 Lotus japonicus
Lj1P1029T48 Lonicera japonica
Lsat_1_v5_gn_2_134840 Lactuca sativa
Manes.01G044100 Manihot esculenta
MBI04_g37612_MAGBIO Magnolia biondii
MBI04_g41177_MAGBIO Magnolia biondii
MBI12_g20086_MAGBIO Magnolia biondii
MD01G1229500 Malus domestica
MD07G1301500 Malus domestica
Medtr3g093000 Medicago truncatula
MELO3C024862.2 Cucumis melo
Migut.F00140 Erythranthe guttata
MSTRG.26967 Avicennia marina
Nitab4.5_0000021g0080 Nicotiana tabacum
Nitab4.5_0006821g0010 Nicotiana tabacum
Nn1g05264 Nelumbo nucifera
Oeu029332.2 Olea europaea
Oeu055400.1 Olea europaea
Peaxi162Scf00912g00114 Petunia axillaris
PGR042G1854 Punica granatum
PGSC0003DMG400000558 Solanum tuberosum
Phvul.009G038600 Phaseolus vulgaris
Potri.002G230100 Populus trichocarpa
Potri.003G206701 Populus trichocarpa
Potri.004G080501 Populus trichocarpa
Potri.012G007000 Populus trichocarpa
Potri.015G003700 Populus trichocarpa
Prupe.2G320100 Prunus persica
Psat5g071280 Pisum sativum
PSO170G0737 Papaver somniferum
PSO782G1897 Papaver somniferum
QL09p006779 Quercus lobata
QL09p006814 Quercus lobata
RcHm_v2.0_Chr1g0383041 Rosa chinensis
Rhsim03G0216600 Rhododendron simsii
Rhsim09G0210400 Rhododendron simsii
Sabra12G0004100 Salix brachista
Sabra12G0008600 Salix brachista
Sabra15G0002400 Salix brachista
SalBow4G2342 Salvia bowleyana
SalBow4G2934 Salvia bowleyana
Sc13g0010540 Simmondsia chinensis
Sed0019147 Sechium edule
SGA_v2.0_scaffold18G08476 Striga asiatica
SGA_v2.0_scaffold44G16853 Striga asiatica
Solyc03g080140.3 Solanum lycopersicum
Sopen03g021870 Solanum pennellii
TAR374G0061 Trochodendron aralioides
TAR374G0213 Trochodendron aralioides
TAR375G0071 Trochodendron aralioides
TAR629G2606 Trochodendron aralioides
TAR629G3494 Trochodendron aralioides
Thecc.03G210000 Theobroma cacao
TPR.G33400 Trifolium pratense
TWI14G0251 Tripterygium wilfordii
TWI23G1261 Tripterygium wilfordii
unitig_0.g2439 Utricularia gibba
vmacro06453 Vaccinium macrocarpon
vmacro10166 Vaccinium macrocarpon
VMungo0540G0174 Vigna mungo
VMungo1309G0886 Vigna mungo

User provided reference genes

Program Settings