Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p08920 Brassica napus
Aa31LG8G9940 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis
Actinidia39917 Actinidia chinensis
Ah.13g072350 Amaranthus hybridus
AL242U10020 Arabidopsis lyrata
AL3G38180 Arabidopsis lyrata
Aqoxy2G03715 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea
AT3G23490 Arabidopsis thaliana
ATR0736G110 Amborella trichopoda
Atru.chr4.1959 Acer truncatum
AUR62002173 Chenopodium quinoa
AUR62015536 Chenopodium quinoa
BcaB02g10054 Brassica carinata
BcaB06g26499 Brassica carinata
BcaB06g27105 Brassica carinata
BcaC06g35534 Brassica carinata
BcaC09g51699 Brassica carinata
BolC2t11169H Brassica oleracea
BolC7t41871H Brassica oleracea
BraA07t28683Z Brassica rapa
C03p47720 Brassica napus
C05p47480 Brassica napus
C07p13760 Brassica napus
CAN.G220.47 Capsicum annuum
CANSAT78G1635 Cannabis sativa
Carub.0003s2372 Capsella rubella
Ca_12138_v3 Cicer arietinum L.
CBR_g36666 Chara braunii
CBR_g71972 Chara braunii
Cc03_g05940 Coffea canephora
CDE02G2281 Ceratophyllum demersum
Cfa014756 Carpinus fangiana
Ciclev10006077m.g Citrus clementina
CiPaw.01G180600 Carya illinoinensis
ClCG05G004140 Citrullus lanatus
COL.COLO4_15934 Corchorus olitorius
Cpa.g.sc44.21 Carica papaya
CsaV3_3G011860 Cucumis sativus L.
CSS0031602 Camellia sinensis var. sinensis
Dinv27090 Davidia involucrata
Dinv29827 Davidia involucrata
Duzib151G0018 Durio zibethinus
ECA248G3216 Erigeron canadensis
EL10Ac3g04969 Beta vulgaris
Eucgr.H02989 Eucalyptus grandis
FAN12G3008 Fragaria x ananassa
FAN17G2925 Fragaria x ananassa
FvH4_4g04220 Fragaria vesca
Glyma.10G005200 Glycine max
Gohir.A02G041301 Gossypium hirsutum
Gohir.A09G228200 Gossypium hirsutum
Gohir.D09G229300 Gossypium hirsutum
Gorai.006G252000 Gossypium raimondii
GSVIVG01027874001 Vitis vinifera
HanXRQChr01g0022881 Helianthus annuus
HanXRQChr04g0115371 Helianthus annuus
Haze_11433 Corylus avellana
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla
HPP92_000029 Vanilla planifolia
HPP92_001387 Vanilla planifolia
Hund11920 Selenicereus undatus
Lalb_Chr03g0037311 Lupinus albus
Lj3A676G52 Lonicera japonica
Lj6g0027143 Lotus japonicus
Lsat_1_v5_gn_1_75161 Lactuca sativa
Manes.13G093430 Manihot esculenta
Mapoly0080s0009 Marchantia polymorpha
MBI07_g15427_MAGBIO Magnolia biondii
MBI07_g22362_MAGBIO Magnolia biondii
MBI14_g30459_MAGBIO Magnolia biondii
MCO04G243 Micromonas commoda
MD13G1218700 Malus domestica
Medtr1g041795 Medicago truncatula
Migut.G00494 Erythranthe guttata
MSTRG.4156 Avicennia marina
Nitab4.5_0000014g0170 Nicotiana tabacum
Nitab4.5_0001425g0100 Nicotiana tabacum
Nitab4.5_0013448g0010 Nicotiana tabacum
Nn1g02903 Nelumbo nucifera
Os10g0471300 Oryza sativa ssp. japonica
Peaxi162Scf00602g00515 Petunia axillaris
PGR004G1080 Punica granatum
PGSC0003DMG400017160 Solanum tuberosum
Phvul.007G275000 Phaseolus vulgaris
Potri.010G068200 Populus trichocarpa
Pp3c19_11440 Physcomitrium patens
Pp3c3_33150 Physcomitrium patens
PRCOL_00005673 Prasinoderma coloniale
Prupe.1G045500 Prunus persica
Psat6g137160 Pisum sativum
PSO210G7176 Papaver somniferum
PSO447G0273 Papaver somniferum
QL06p020043 Quercus lobata
RcHm_v2.0_Chr4g0394701 Rosa chinensis
Rhsim02G0042500 Rhododendron simsii
Sabra10G0038900 Salix brachista
SalBow3G1837 Salvia bowleyana
Sc25g0003620 Simmondsia chinensis
Sed0021014 Sechium edule
SGA_v2.0_scaffold67G22735 Striga asiatica
SMO271G0046 Selaginella moellendorffii
Solyc09g090430.3 Solanum lycopersicum
Sopen09g033350 Solanum pennellii
Sp3g21170 Schrenkiella parvula
SpUn0047_0050 Schrenkiella parvula
THA.LOC104804764 Tarenaya hassleriana
Thecc.04G260300 Theobroma cacao
Thhalv10021585m.g Eutrema salsugineum
TPR.G25151 Trifolium pratense
TWI09G0269 Tripterygium wilfordii
TWI09G1522 Tripterygium wilfordii
vmacro15465 Vaccinium macrocarpon
vmacro15466 Vaccinium macrocarpon
VMungo0720G2665 Vigna mungo
Zm00001eb046120 Zea mays

User provided reference genes

Program Settings