Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p00100 Brassica napus
Aa31LG10G160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2491 Anthoceros agrestis
Actinidia07365 Actinidia chinensis
Actinidia12777 Actinidia chinensis
Ah.16g106470 Amaranthus hybridus
AL1G64350 Arabidopsis lyrata
Aqoxy1G01470 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.41FYNA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JFLR83 Arachis hypogaea
AT1G56090 Arabidopsis thaliana
ATR0763G149 Amborella trichopoda
Atru.chr1.194 Acer truncatum
AUR62042421 Chenopodium quinoa
AUR62044139 Chenopodium quinoa
BcaB04g16921 Brassica carinata
BolC3t21637H Brassica oleracea
BraA08t32067Z Brassica rapa
C03p93400 Brassica napus
CAN.G943.45 Capsicum annuum
CANSAT80G1595 Cannabis sativa
CARHR045820 Cardamine hirsuta
Carub.0001s4469 Capsella rubella
Ca_03654_v3 Cicer arietinum L.
Cc05_g16240 Coffea canephora
CDE04G2116 Ceratophyllum demersum
Cfa019412 Carpinus fangiana
Ciclev10005569m.g Citrus clementina
CiPaw.01G120000 Carya illinoinensis
CiPaw.02G065800 Carya illinoinensis
ClCG02G018590 Citrullus lanatus
COL.COLO4_38369 Corchorus olitorius
Cpa.g.sc468.1 Carica papaya
CsaV3_6G013610 Cucumis sativus L.
CSS0038434 Camellia sinensis var. sinensis
CSS0049056 Camellia sinensis var. sinensis
DCAR_019927 Daucus carota
Dinv19605 Davidia involucrata
Duzib213G0371 Durio zibethinus
ECA236G4704 Erigeron canadensis
EL10Ac2g03282 Beta vulgaris
Eucgr.F04427 Eucalyptus grandis
FAN11G0473 Fragaria x ananassa
FAN16G3403 Fragaria x ananassa
FAN21G3142 Fragaria x ananassa
FAN25G3348 Fragaria x ananassa
FvH4_3g15510 Fragaria vesca
Glyma.08G168700 Glycine max
Glyma.15G258500 Glycine max
Gohir.A01G095800 Gossypium hirsutum
Gohir.A04G051400 Gossypium hirsutum
Gohir.D01G080100 Gossypium hirsutum
Gohir.D05G329900 Gossypium hirsutum
Gorai.002G104800 Gossypium raimondii
Gorai.009G353300 Gossypium raimondii
GSVIVG01020279001 Vitis vinifera
HanXRQChr11g0335031 Helianthus annuus
Haze_07841 Corylus avellana
Hma1.2p1_0933F.1_g238380 Hydrangea macrophylla
HPP92_020506 Vanilla planifolia
Hund20096 Selenicereus undatus
Lalb_Chr25g0284841 Lupinus albus
Lj1A907T22 Lonicera japonica
Lj3g0020848 Lotus japonicus
Lsat_1_v5_gn_7_111741 Lactuca sativa
Manes.06G174200 Manihot esculenta
Manes.14G011700 Manihot esculenta
Mapoly0043s0136 Marchantia polymorpha
MBI01_g45067_MAGBIO Magnolia biondii
MBI14_g16766_MAGBIO Magnolia biondii
MBI14_g16769_MAGBIO Magnolia biondii
MBI14_g38409_MAGBIO Magnolia biondii
MBI19_g29231_MAGBIO Magnolia biondii
MD05G1222700 Malus domestica
MD10G1204300 Malus domestica
Medtr2g067860 Medicago truncatula
Medtr2g067870 Medicago truncatula
MELO3C019651.2 Cucumis melo
Migut.H01683 Erythranthe guttata
MSTRG.14550 Avicennia marina
Nitab4.5_0002321g0030 Nicotiana tabacum
Nitab4.5_0002633g0010 Nicotiana tabacum
Nn7g37920 Nelumbo nucifera
Oeu031998.1 Olea europaea
Os04g0616100 Oryza sativa ssp. japonica
Peaxi162Scf00452g00625 Petunia axillaris
PGR004G2050 Punica granatum
PGSC0003DMG400022122 Solanum tuberosum
Phvul.005G050600 Phaseolus vulgaris
Potri.005G097300 Populus trichocarpa
Pp3c12_16150 Physcomitrium patens
Pp3c3_32820 Physcomitrium patens
Pp3c4_11850 Physcomitrium patens
Prupe.4G137600 Prunus persica
Psat1g003600 Pisum sativum
QL04p077146 Quercus lobata
RcHm_v2.0_Chr5g0026131 Rosa chinensis
Rhsim06G0240200 Rhododendron simsii
Sabra05G0079600 Salix brachista
SalBow8G4165 Salvia bowleyana
Sc09g0007630 Simmondsia chinensis
Sed0000278 Sechium edule
Sed0018431 Sechium edule
SEGI_26280 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40208 Striga asiatica
SMO364G0850 Selaginella moellendorffii
SMO365G0063 Selaginella moellendorffii
Solyc07g066530.4 Solanum lycopersicum
Sopen07g034690 Solanum pennellii
Sp1g41740 Schrenkiella parvula
TAR383G0051 Trochodendron aralioides
TAR626G0823 Trochodendron aralioides
THA.LOC104815722 Tarenaya hassleriana
Thecc.07G160400 Theobroma cacao
Thhalv10011720m.g Eutrema salsugineum
TPR.G33804 Trifolium pratense
TWI38G1376 Tripterygium wilfordii
unitig_578.g16054 Utricularia gibba
vmacro11716 Vaccinium macrocarpon
VMungo1080G1904 Vigna mungo
Zm00001eb070740 Zea mays

User provided reference genes

Program Settings