Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p21790 Brassica napus
Aa31LG4G14340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.195 Anthoceros agrestis
Actinidia07225 Actinidia chinensis
Actinidia24190 Actinidia chinensis
Ah.15g095620 Amaranthus hybridus
AL5G22760 Arabidopsis lyrata
AL5G22830 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea
AT3G44485 Arabidopsis thaliana
AT3G44620 Arabidopsis thaliana
AT3G44665 Arabidopsis thaliana
ATR0820G177 Amborella trichopoda
Atru.chr3.3344 Acer truncatum
AUR62009801 Chenopodium quinoa
AUR62039249 Chenopodium quinoa
BcaB01g01150 Brassica carinata
BcaC01g02065 Brassica carinata
BolC3t19153H Brassica oleracea
BraA06t25266Z Brassica rapa
C03p69000 Brassica napus
CAN.G644.11 Capsicum annuum
CANSAT54G3044 Cannabis sativa
CARHR151530 Cardamine hirsuta
Carub.0005s1026 Capsella rubella
Carub.0015s0012 Capsella rubella
Carub.0015s0017 Capsella rubella
Ca_19382_v3 Cicer arietinum L.
CBR_g19487 Chara braunii
CBR_g29713 Chara braunii
Cc01_g09580 Coffea canephora
CDE06G0522 Ceratophyllum demersum
CDE08G1146 Ceratophyllum demersum
Cfa010067 Carpinus fangiana
CiPaw.13G139500 Carya illinoinensis
ClCG02G022010 Citrullus lanatus
Cre12.g543900 Chlamydomonas reinhardtii
Cre14.g632767 Chlamydomonas reinhardtii
CsaV3_6G014840 Cucumis sativus L.
CSS0006150 Camellia sinensis var. sinensis
CSS0022960 Camellia sinensis var. sinensis
DCAR_006154 Daucus carota
Dinv29440 Davidia involucrata
Duzib168G0232 Durio zibethinus
Duzib170G0763 Durio zibethinus
EL10Ac7g15785 Beta vulgaris
Eucgr.J00458 Eucalyptus grandis
FAN25G2701 Fragaria x ananassa
FvH4_3g24360 Fragaria vesca
Glyma.11G187700 Glycine max
Glyma.12G086800 Glycine max
Gohir.A05G082800 Gossypium hirsutum
Gohir.D05G085700 Gossypium hirsutum
GSVIVG01023086001 Vitis vinifera
GSVIVG01031373001 Vitis vinifera
HanXRQChr01g0019741 Helianthus annuus
Haze_23431 Corylus avellana
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla
HPP92_013801 Vanilla planifolia
Hund20864 Selenicereus undatus
Lalb_Chr19g0136681 Lupinus albus
Lj2A991T88 Lonicera japonica
Lj3g0022718 Lotus japonicus
Lsat_1_v5_gn_1_62060 Lactuca sativa
Manes.04G006800 Manihot esculenta
Manes.11G159300 Manihot esculenta
Mapoly0054s0048 Marchantia polymorpha
Mapoly0056s0130 Marchantia polymorpha
MD11G1159700 Malus domestica
Medtr4g055030 Medicago truncatula
MELO3C021441.2 Cucumis melo
Migut.N02505 Erythranthe guttata
Nitab4.5_0006735g0030 Nicotiana tabacum
Nitab4.5_0009861g0020 Nicotiana tabacum
Nn2g14062 Nelumbo nucifera
Nn6g35002 Nelumbo nucifera
Oeu035544.1 Olea europaea
Os08g0557400 Oryza sativa ssp. japonica
Peaxi162Scf01284g00017 Petunia axillaris
PGR119G1752 Punica granatum
PGSC0003DMG400026546 Solanum tuberosum
Phvul.011G091000 Phaseolus vulgaris
Potri.004G186400 Populus trichocarpa
Potri.009G146800 Populus trichocarpa
Pp3c1_29030 Physcomitrium patens
Pp3c2_15060 Physcomitrium patens
PRCOL_00004711 Prasinoderma coloniale
Prupe.6G122700 Prunus persica
Psat7g189840 Pisum sativum
PSO339G3959 Papaver somniferum
PSO384G2883 Papaver somniferum
QL01p013359 Quercus lobata
RcHm_v2.0_Chr5g0043851 Rosa chinensis
Rhsim13G0107300 Rhododendron simsii
Sabra04G0125600 Salix brachista
Sabra09G0115900 Salix brachista
SalBow6G0396 Salvia bowleyana
Sc21g0004770 Simmondsia chinensis
Sed0010741 Sechium edule
SEGI_31986 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36353 Striga asiatica
SMO356G0095 Selaginella moellendorffii
Solyc11g067060.3 Solanum lycopersicum
Sopen11g026770 Solanum pennellii
Sp5g16580 Schrenkiella parvula
TAR633G2780 Trochodendron aralioides
THA.LOC104810902 Tarenaya hassleriana
Thecc.09G288800 Theobroma cacao
Thhalv10002731m.g Eutrema salsugineum
Thhalv10003008m.g Eutrema salsugineum
TPR.G15571 Trifolium pratense
TPR.G9708 Trifolium pratense
TWI79G0266 Tripterygium wilfordii
TWI79G0985 Tripterygium wilfordii
unitig_8.g3286 Utricularia gibba
vmacro03292 Vaccinium macrocarpon
VMungo1127G2203 Vigna mungo
Zm00001eb039610 Zea mays
Zm00001eb339600 Zea mays
Zm00001eb382760 Zea mays

User provided reference genes

Program Settings