Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16110 Brassica napus
A06p48720 Brassica napus
Aa31LG6G16210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis
AL4G10520 Arabidopsis lyrata
AL7G10980 Arabidopsis lyrata
Aqoxy6G02397 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea
AT2G21350 Arabidopsis thaliana
AT4G39040 Arabidopsis thaliana
ATR0661G343 Amborella trichopoda
Atru.chr5.3116 Acer truncatum
AUR62010412 Chenopodium quinoa
AUR62016804 Chenopodium quinoa
BcaC02g08796 Brassica carinata
BcaNung01286 Brassica carinata
BcaNung01943 Brassica carinata
BolC4t26655H Brassica oleracea
BolC7t46749H Brassica oleracea
BraA04t17251Z Brassica rapa
BraA06t27738Z Brassica rapa
C04p50570 Brassica napus
C07p63380 Brassica napus
CAN.G170.87 Capsicum annuum
CANSAT11G0453 Cannabis sativa
CARHR112230 Cardamine hirsuta
CARHR247710 Cardamine hirsuta
Carub.0004s0039 Capsella rubella
Carub.0007s0091 Capsella rubella
Ca_20923_v3 Cicer arietinum L.
CBR_g11057 Chara braunii
Cc02_g17030 Coffea canephora
CDE02G3850 Ceratophyllum demersum
CDE09G0634 Ceratophyllum demersum
Cfa005079 Carpinus fangiana
Ciclev10028627m.g Citrus clementina
CiPaw.06G130600 Carya illinoinensis
ClCG02G004640 Citrullus lanatus
COL.COLO4_26029 Corchorus olitorius
Cpa.g.sc150.36 Carica papaya
CsaV3_7G000290 Cucumis sativus L.
CSS0016085 Camellia sinensis var. sinensis
CSS0027643 Camellia sinensis var. sinensis
DCAR_022798 Daucus carota
Dinv23471 Davidia involucrata
Duzib132G1122 Durio zibethinus
ECA247G1974 Erigeron canadensis
EL10Ac9g21659 Beta vulgaris
Eucgr.G01718 Eucalyptus grandis
FAN05G0067 Fragaria x ananassa
FAN05G1359 Fragaria x ananassa
FAN09G3166 Fragaria x ananassa
FAN15G0580 Fragaria x ananassa
FAN18G1095 Fragaria x ananassa
FAN19G2814 Fragaria x ananassa
FAN24G1192 Fragaria x ananassa
FAN27G0283 Fragaria x ananassa
FvH4_2g10110 Fragaria vesca
Glyma.11G112300 Glycine max
Gohir.A12G041400 Gossypium hirsutum
Gohir.D12G030800 Gossypium hirsutum
Gorai.008G031700 Gossypium raimondii
GSVIVG01024200001 Vitis vinifera
HanXRQChr05g0139661 Helianthus annuus
Haze_02302 Corylus avellana
Haze_22123 Corylus avellana
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla
HPP92_007403 Vanilla planifolia
Hund06269 Selenicereus undatus
Lalb_Chr01g0002221 Lupinus albus
Lj3g0021213 Lotus japonicus
Lj5P190T58 Lonicera japonica
Lsat_1_v5_gn_4_68441 Lactuca sativa
Manes.04G084900 Manihot esculenta
Mapoly0113s0060 Marchantia polymorpha
MBI05_g30638_MAGBIO Magnolia biondii
MD05G1057700 Malus domestica
MD10G1065400 Malus domestica
Medtr4g071330 Medicago truncatula
MELO3C013428.2 Cucumis melo
Migut.B00188 Erythranthe guttata
MSTRG.16840 Avicennia marina
Nitab4.5_0002723g0110 Nicotiana tabacum
Nitab4.5_0010034g0020 Nicotiana tabacum
Nn6g32216 Nelumbo nucifera
Oeu008579.1 Olea europaea
Os10g0512500 Oryza sativa ssp. japonica
Peaxi162Scf00016g00142 Petunia axillaris
PGR042G2699 Punica granatum
PGSC0003DMG400003128 Solanum tuberosum
Phvul.011G040400 Phaseolus vulgaris
Potri.009G122500 Populus trichocarpa
Pp3c1_22260 Physcomitrium patens
Prupe.8G087400 Prunus persica
Psat0s2721g0040 Pisum sativum
PSO541G0619 Papaver somniferum
QL11p045794 Quercus lobata
RcHm_v2.0_Chr6g0267071 Rosa chinensis
SalBow6G1011 Salvia bowleyana
Sc18g0005310 Simmondsia chinensis
Sed0000071 Sechium edule
Sed0001649 Sechium edule
SGA_v2.0_scaffold58G20474 Striga asiatica
SMO367G1025 Selaginella moellendorffii
Solyc01g110270.3 Solanum lycopersicum
Sopen01g052420 Solanum pennellii
Sp4g00530 Schrenkiella parvula
Sp7g36790 Schrenkiella parvula
TAR376G0115 Trochodendron aralioides
THA.LOC104807761 Tarenaya hassleriana
Thecc.02G077600 Theobroma cacao
Thhalv10000312m.g Eutrema salsugineum
Thhalv10025960m.g Eutrema salsugineum
TPR.G16241 Trifolium pratense
TWI75G0841 Tripterygium wilfordii
unitig_32.g11060 Utricularia gibba
vmacro02064 Vaccinium macrocarpon
VMungo1127G0939 Vigna mungo
Zm00001eb220380 Zea mays

User provided reference genes

Program Settings