Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16420 Brassica napus
Aa31LG3G7470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1750 Anthoceros agrestis
Actinidia18289 Actinidia chinensis
Actinidia25512 Actinidia chinensis
Ah.11g046980 Amaranthus hybridus
AL8G25220 Arabidopsis lyrata
Aqoxy3G01868 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1BW3L6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D72E2J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FT61ID Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z544U3 Arachis hypogaea
AT5G51010 Arabidopsis thaliana
ATR0582G272 Amborella trichopoda
Atru.chr6.1936 Acer truncatum
AUR62032209 Chenopodium quinoa
AUR62043377 Chenopodium quinoa
BcaC01g06063 Brassica carinata
BcaC01g06113 Brassica carinata
BolC3t14317H Brassica oleracea
BraA03t10932Z Brassica rapa
C03p19310 Brassica napus
CAN.G1008.52 Capsicum annuum
CARHR257180 Cardamine hirsuta
Carub.0008s1101 Capsella rubella
Ca_10875_v3 Cicer arietinum L.
Cc04_g05780 Coffea canephora
CDE05G2456 Ceratophyllum demersum
CDE05G3351 Ceratophyllum demersum
Ciclev10032925m.g Citrus clementina
CiPaw.12G000500 Carya illinoinensis
ClCG06G018300 Citrullus lanatus
COL.COLO4_37268 Corchorus olitorius
Cpa.g.sc2215.2 Carica papaya
Cre24.g755197 Chlamydomonas reinhardtii
CsaV3_1G000140 Cucumis sativus L.
CSS0045487 Camellia sinensis var. sinensis
CSS0048618 Camellia sinensis var. sinensis
DCAR_016335 Daucus carota
Dinv13711 Davidia involucrata
Dinv23234 Davidia involucrata
Duzib084G1311 Durio zibethinus
Duzib205G0637 Durio zibethinus
EL10Ac5g11273 Beta vulgaris
Eucgr.K02190 Eucalyptus grandis
FAN13G1824 Fragaria x ananassa
FvH4_5g09700 Fragaria vesca
Glyma.04G202300 Glycine max
Glyma.05G199700 Glycine max
Glyma.06G163200 Glycine max
Glyma.08G007200 Glycine max
Glyma.17G183301 Glycine max
Gohir.A12G194100 Gossypium hirsutum
Gohir.D12G196500 Gossypium hirsutum
Gorai.008G211100 Gossypium raimondii
GSVIVG01008662001 Vitis vinifera
HanXRQChr09g0273781 Helianthus annuus
Haze_07089 Corylus avellana
Hma1.2p1_0452F.1_g155930 Hydrangea macrophylla
Hund10027 Selenicereus undatus
Lalb_Chr08g0237591 Lupinus albus
Lj1g0000604 Lotus japonicus
Lj4g0018315 Lotus japonicus
Lj5C86G18 Lonicera japonica
Lj9A488T61 Lonicera japonica
Lsat_1_v5_gn_4_84301 Lactuca sativa
Manes.06G127300 Manihot esculenta
Mapoly0119s0028 Marchantia polymorpha
Mapoly0188s0012 Marchantia polymorpha
MD06G1129100 Malus domestica
MD14G1146000 Malus domestica
Medtr3g098520 Medicago truncatula
MELO3C026168.2 Cucumis melo
Migut.I00665 Erythranthe guttata
MSTRG.22813 Avicennia marina
Nitab4.5_0000976g0110 Nicotiana tabacum
Nitab4.5_0010893g0030 Nicotiana tabacum
Nn4g22122 Nelumbo nucifera
Oeu013667.1 Olea europaea
Os11g0528500 Oryza sativa ssp. japonica
Peaxi162Scf00314g00728 Petunia axillaris
PGR142G3652 Punica granatum
PGSC0003DMG400014238 Solanum tuberosum
Phvul.002G280900 Phaseolus vulgaris
Phvul.009G160600 Phaseolus vulgaris
Potri.012G109700 Populus trichocarpa
Potri.015G108100 Populus trichocarpa
Pp3c14_10490 Physcomitrium patens
Pp3c20_8260 Physcomitrium patens
Pp3c2_6110 Physcomitrium patens
Prupe.5G140400 Prunus persica
Psat5g055480 Pisum sativum
PSO017G3202 Papaver somniferum
PSO478G4148 Papaver somniferum
QL10p000304 Quercus lobata
RcHm_v2.0_Chr7g0188541 Rosa chinensis
Rhsim08G0198600 Rhododendron simsii
Sabra15G0128400 Salix brachista
Sabra15G0130800 Salix brachista
SalBow7G0306 Salvia bowleyana
Sc22g0003260 Simmondsia chinensis
Sed0010334 Sechium edule
SEGI_04043 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14674 Striga asiatica
SMO116G0387 Selaginella moellendorffii
SMO165G0067 Selaginella moellendorffii
Solyc03g118130.3 Solanum lycopersicum
Sopen03g037030 Solanum pennellii
Sp6g13160 Schrenkiella parvula
TAR371G0070 Trochodendron aralioides
TAR622G0574 Trochodendron aralioides
THA.LOC104811555 Tarenaya hassleriana
Thecc.03G141700 Theobroma cacao
Thhalv10014834m.g Eutrema salsugineum
TWI14G0928 Tripterygium wilfordii
TWI39G0437 Tripterygium wilfordii
unitig_52.g17484 Utricularia gibba
vmacro19114 Vaccinium macrocarpon
vmacro19194 Vaccinium macrocarpon
VMungo0251G1538 Vigna mungo
Zm00001eb113350 Zea mays

User provided reference genes

Program Settings