Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p51790 Brassica napus
Aa31LG10G13850 Aethionema arabicum
AL5G41440 Arabidopsis lyrata
Aqoxy2G04152 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C0G1TY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NE1CMA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4WUKA Arachis hypogaea
AT3G59520 Arabidopsis thaliana
ATR0743G075 Amborella trichopoda
Atru.chr4.1246 Acer truncatum
AUR62002333 Chenopodium quinoa
AUR62023855 Chenopodium quinoa
BcaC02g10058 Brassica carinata
BolC8t51053H Brassica oleracea
BraA09t40614Z Brassica rapa
C08p34520 Brassica napus
CAN.G136.18 Capsicum annuum
CANSAT78G1363 Cannabis sativa
CARHR169900 Cardamine hirsuta
Carub.0005s2625 Capsella rubella
Ca_20795_v3 Cicer arietinum L.
CBR_g12522 Chara braunii
CBR_g3657 Chara braunii
Cc04_g06020 Coffea canephora
Cfa000631 Carpinus fangiana
Ciclev10021679m.g Citrus clementina
CiPaw.02G053100 Carya illinoinensis
ClCG06G000950 Citrullus lanatus
Cpa.g.sc9.302 Carica papaya
Cre11.g467677 Chlamydomonas reinhardtii
CsaV3_6G006800 Cucumis sativus L.
CSS0015670 Camellia sinensis var. sinensis
DCAR_028434 Daucus carota
Dinv22753 Davidia involucrata
Dinv44177 Davidia involucrata
Duzib151G1217 Durio zibethinus
Duzib268G1702 Durio zibethinus
ECA233G4748 Erigeron canadensis
EL10Ac3g05986 Beta vulgaris
Eucgr.A00099 Eucalyptus grandis
FAN02G2944 Fragaria x ananassa
FAN05G3471 Fragaria x ananassa
FAN09G1035 Fragaria x ananassa
FAN14G5370 Fragaria x ananassa
FvH4_6g51270 Fragaria vesca
Glyma.11G126900 Glycine max
Glyma.12G051500 Glycine max
Gohir.A02G011800 Gossypium hirsutum
Gohir.A02G093700 Gossypium hirsutum
Gohir.D02G012600 Gossypium hirsutum
Gohir.D02G111600 Gossypium hirsutum
Gorai.005G016100 Gossypium raimondii
Gorai.005G126600 Gossypium raimondii
GSVIVG01010795001 Vitis vinifera
HanXRQChr15g0469161 Helianthus annuus
Haze_01468 Corylus avellana
HPP92_013566 Vanilla planifolia
Lalb_Chr01g0003121 Lupinus albus
Lalb_Chr03g0026051 Lupinus albus
Lalb_Chr19g0138371 Lupinus albus
Lj6C78T6 Lonicera japonica
Lju682C5T3 Lonicera japonica
Lsat_1_v5_gn_5_71141 Lactuca sativa
Manes.04G044300 Manihot esculenta
Manes.11G122600 Manihot esculenta
Mapoly0003s0018 Marchantia polymorpha
MBI07_g02895_MAGBIO Magnolia biondii
MCO15G668 Micromonas commoda
MD03G1281100 Malus domestica
MD10G1004100 Malus domestica
Medtr4g067340 Medicago truncatula
MELO3C022444.2 Cucumis melo
Migut.N03101 Erythranthe guttata
MSTRG.22006 Avicennia marina
Nitab4.5_0001586g0090 Nicotiana tabacum
Nitab4.5_0006064g0060 Nicotiana tabacum
Nn7g37557 Nelumbo nucifera
Nn7g37598 Nelumbo nucifera
Oeu003367.1 Olea europaea
Oeu020509.1 Olea europaea
Oeu034449.1 Olea europaea
Os01g0895500 Oryza sativa ssp. japonica
Peaxi162Scf00184g00072 Petunia axillaris
PGR083G2474 Punica granatum
PGSC0003DMG400016303 Solanum tuberosum
Phvul.011G053600 Phaseolus vulgaris
Potri.007G130300 Populus trichocarpa
Potri.017G027800 Populus trichocarpa
Pp3c18_5250 Physcomitrium patens
Pp3c21_15770 Physcomitrium patens
PRCOL_00000202 Prasinoderma coloniale
Prupe.8G006500 Prunus persica
Psat7g209520 Pisum sativum
PSO017G5579 Papaver somniferum
PSO675G0996 Papaver somniferum
QL10p050520 Quercus lobata
RcHm_v2.0_Chr2g0172871 Rosa chinensis
Rhsim02G0081600 Rhododendron simsii
Rhsim09G0023800 Rhododendron simsii
Sabra07G0106000 Salix brachista
Sabra17G0016800 Salix brachista
SalBow6G5841 Salvia bowleyana
Sc13g0006740 Simmondsia chinensis
Sed0005729 Sechium edule
SEGI_39406 Sequoiadendron giganteum
SGA_v2.0_scaffold17G08152 Striga asiatica
SHI23489 Sapria himalayana
SMO358G0698 Selaginella moellendorffii
Solyc06g053370.3 Solanum lycopersicum
Sopen06g018420 Solanum pennellii
Sp5g03640 Schrenkiella parvula
TAR633G0985 Trochodendron aralioides
THA.LOC104802315 Tarenaya hassleriana
THA.LOC104803815 Tarenaya hassleriana
Thecc.04G176000 Theobroma cacao
Thhalv10006170m.g Eutrema salsugineum
TPR.G34198 Trifolium pratense
TWI15G0378 Tripterygium wilfordii
unitig_22.g5711 Utricularia gibba
VMungo1127G1158 Vigna mungo
Zm00001eb365770 Zea mays

User provided reference genes

Program Settings