Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20910 Brassica napus
A08p12540 Brassica napus
Aa31LG2G12620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis
Actinidia05199 Actinidia chinensis
Ah.12g056690 Amaranthus hybridus
AL7G38450 Arabidopsis lyrata
Aqoxy5G03914 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea
AT4G16510 Arabidopsis thaliana
ATR0564G418 Amborella trichopoda
Atru.chr9.1340 Acer truncatum
AUR62007500 Chenopodium quinoa
AUR62039953 Chenopodium quinoa
BcaC07g37993 Brassica carinata
BolC1t02568H Brassica oleracea
BolC8t48376H Brassica oleracea
BraA01t02010Z Brassica rapa
BraA08t33245Z Brassica rapa
C01p26240 Brassica napus
CAN.G1227.10 Capsicum annuum
CANSAT21G1011 Cannabis sativa
CARHR222910 Cardamine hirsuta
Carub.0007s2499 Capsella rubella
Ca_21955_v3 Cicer arietinum L.
Ca_22220_v3 Cicer arietinum L.
CBR_g26463 Chara braunii
Cc08_g12700 Coffea canephora
CDE02G1947 Ceratophyllum demersum
Cfa012746 Carpinus fangiana
Ciclev10022042m.g Citrus clementina
CiPaw.11G152400 Carya illinoinensis
ClCG10G002780 Citrullus lanatus
Cpa.g.sc276.6 Carica papaya
Cre07.g338250 Chlamydomonas reinhardtii
CsaV3_3G002820 Cucumis sativus L.
CSS0044555 Camellia sinensis var. sinensis
DCAR_004944 Daucus carota
DCAR_004945 Daucus carota
DCAR_027784 Daucus carota
Dinv21617 Davidia involucrata
Dinv39125 Davidia involucrata
Duzib068G0053 Durio zibethinus
Duzib205G0315 Durio zibethinus
ECA240G2825 Erigeron canadensis
EL10Ac5g13049 Beta vulgaris
Eucgr.E00435 Eucalyptus grandis
FAN04G0341 Fragaria x ananassa
FAN08G0873 Fragaria x ananassa
FAN13G0450 Fragaria x ananassa
FAN18G2132 Fragaria x ananassa
Glyma.05G058200 Glycine max
Gohir.A12G219900 Gossypium hirsutum
Gohir.D12G222100 Gossypium hirsutum
Gorai.008G238100 Gossypium raimondii
GSVIVG01001305001 Vitis vinifera
HanXRQChr03g0088651 Helianthus annuus
Haze_07882 Corylus avellana
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla
HPP92_014478 Vanilla planifolia
Hund14588 Selenicereus undatus
Lalb_Chr05g0225741 Lupinus albus
Lj2A215T22 Lonicera japonica
Lj4g0001078 Lotus japonicus
Lsat_1_v5_gn_6_91561 Lactuca sativa
Manes.01G079200 Manihot esculenta
Mapoly0121s0036 Marchantia polymorpha
MCO15G182 Micromonas commoda
MD00G1115100 Malus domestica
MD06G1061300 Malus domestica
Medtr4g101100 Medicago truncatula
MELO3C013948.2 Cucumis melo
Migut.A00961 Erythranthe guttata
MSTRG.25531 Avicennia marina
Nitab4.5_0000312g0210 Nicotiana tabacum
Nitab4.5_0001707g0010 Nicotiana tabacum
Nitab4.5_0004059g0060 Nicotiana tabacum
Nitab4.5_0017825g0010 Nicotiana tabacum
Nn6g34002 Nelumbo nucifera
Oeu062975.1 Olea europaea
Os02g0662200 Oryza sativa ssp. japonica
Peaxi162Scf00002g00156 Petunia axillaris
Peaxi162Scf00102g01151 Petunia axillaris
PGR042G2887 Punica granatum
PGSC0003DMG400012506 Solanum tuberosum
Phvul.003G219500 Phaseolus vulgaris
Potri.001G122501 Populus trichocarpa
Potri.003G111100 Populus trichocarpa
Potri.008G135980 Populus trichocarpa
Pp3c24_4050 Physcomitrium patens
PRCOL_00001140 Prasinoderma coloniale
Prupe.5G072600 Prunus persica
Psat4g070160 Pisum sativum
PSO063G6697 Papaver somniferum
PSO782G3692 Papaver somniferum
QL12p012693 Quercus lobata
RcHm_v2.0_Chr7g0202881 Rosa chinensis
Rhsim07G0106500 Rhododendron simsii
Rhsim07G0107100 Rhododendron simsii
Sabra01G0094400 Salix brachista
Sabra03G0077000 Salix brachista
SalBow6G7145 Salvia bowleyana
Sc01g0008570 Simmondsia chinensis
Sed0019633 Sechium edule
SEGI_31519 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32870 Striga asiatica
SMO143G0241 Selaginella moellendorffii
Solyc08g007410.4 Solanum lycopersicum
Sopen08g003360 Solanum pennellii
Sp7g15070 Schrenkiella parvula
TAR636G0287 Trochodendron aralioides
THA.LOC104814709 Tarenaya hassleriana
Thecc.03G254100 Theobroma cacao
Thhalv10026162m.g Eutrema salsugineum
TPR.G37669 Trifolium pratense
TWI81G0482 Tripterygium wilfordii
unitig_27.g25096 Utricularia gibba
vmacro14091 Vaccinium macrocarpon
VMungo0251G2371 Vigna mungo
Zm00001eb249830 Zea mays

User provided reference genes

Program Settings