Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p53900 Brassica napus
Aa31LG10G15890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis
Actinidia28101 Actinidia chinensis
Ah.05g179220 Amaranthus hybridus
AL5G44450 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea
AT3G61870 Arabidopsis thaliana
ATR0620G070 Amborella trichopoda
Atru.chr5.731 Acer truncatum
AUR62004534 Chenopodium quinoa
AUR62022720 Chenopodium quinoa
BcaC07g42601 Brassica carinata
BolC8t51253H Brassica oleracea
BraA09t40806Z Brassica rapa
C08p36710 Brassica napus
CAN.G1415.2 Capsicum annuum
CANSAT56G2365 Cannabis sativa
CARHR172210 Cardamine hirsuta
Carub.0005s2861 Capsella rubella
Ca_09530_v3 Cicer arietinum L.
CBR_g37545 Chara braunii
Cc02_g39740 Coffea canephora
CDE07G1250 Ceratophyllum demersum
CDE09G1080 Ceratophyllum demersum
Cfa003762 Carpinus fangiana
Ciclev10021628m.g Citrus clementina
CiPaw.01G079400 Carya illinoinensis
ClCG05G000610 Citrullus lanatus
COL.COLO4_06257 Corchorus olitorius
Cpa.g.sc144.12 Carica papaya
Cre12.g519300 Chlamydomonas reinhardtii
CsaV3_3G007830 Cucumis sativus L.
CSS0022670 Camellia sinensis var. sinensis
CSS0025910 Camellia sinensis var. sinensis
DCAR_008654 Daucus carota
Dinv34238 Davidia involucrata
Duzib138G0935 Durio zibethinus
ECA240G4795 Erigeron canadensis
EL10Ac1g00220 Beta vulgaris
Eucgr.D02642 Eucalyptus grandis
FAN01G0947 Fragaria x ananassa
FAN03G0022 Fragaria x ananassa
FAN06G3280 Fragaria x ananassa
FAN06G3756 Fragaria x ananassa
FAN10G2512 Fragaria x ananassa
FAN10G3243 Fragaria x ananassa
FvH4_7g17240 Fragaria vesca
Glyma.03G259400 Glycine max
Glyma.16G021600 Glycine max
Glyma.19G258300 Glycine max
Gohir.A11G099200 Gossypium hirsutum
Gohir.D11G103700 Gossypium hirsutum
Gorai.007G111000 Gossypium raimondii
GSVIVG01001070001 Vitis vinifera
GSVIVG01027398001 Vitis vinifera
HanXRQChr03g0094051 Helianthus annuus
Haze_15698 Corylus avellana
HPP92_002500 Vanilla planifolia
Hund16731 Selenicereus undatus
Lalb_Chr17g0342841 Lupinus albus
Lalb_Chr19g0133561 Lupinus albus
Lj1g0014889 Lotus japonicus
Lj9A602T26 Lonicera japonica
Lsat_1_v5_gn_3_141021 Lactuca sativa
Manes.05G019200 Manihot esculenta
Mapoly0049s0137 Marchantia polymorpha
MBI04_g33414_MAGBIO Magnolia biondii
MCO07G366 Micromonas commoda
MD01G1086200 Malus domestica
MD07G1155100 Malus domestica
Medtr7g117970 Medicago truncatula
MELO3C005999.2 Cucumis melo
Migut.N01525 Erythranthe guttata
MSTRG.28278 Avicennia marina
MSTRG.4800 Avicennia marina
Nitab4.5_0000307g0140 Nicotiana tabacum
Nitab4.5_0002527g0020 Nicotiana tabacum
Nn1g00373 Nelumbo nucifera
Oeu007870.1 Olea europaea
Os02g0122500 Oryza sativa ssp. japonica
Peaxi162Scf00767g00111 Petunia axillaris
PGR031G0416 Punica granatum
PGSC0003DMG400000125 Solanum tuberosum
Phvul.006G115700 Phaseolus vulgaris
Phvul.010G116700 Phaseolus vulgaris
Potri.014G102400 Populus trichocarpa
Pp3c5_3210 Physcomitrium patens
PRCOL_00004956 Prasinoderma coloniale
Prupe.2G193800 Prunus persica
Prupe.6G248300 Prunus persica
Psat3g001400 Pisum sativum
PSO063G1328 Papaver somniferum
PSO782G2421 Papaver somniferum
QL08p046273 Quercus lobata
RcHm_v2.0_Chr1g0360621 Rosa chinensis
Rhsim01G0176500 Rhododendron simsii
Sabra14G0075400 Salix brachista
SalBow5G1997 Salvia bowleyana
Sc23g0001960 Simmondsia chinensis
Sed0011774 Sechium edule
SEGI_25065 Sequoiadendron giganteum
SGA_v2.0_scaffold581G53044 Striga asiatica
SMO143G0155 Selaginella moellendorffii
Solyc01g096240.4 Solanum lycopersicum
Sopen01g040000 Solanum pennellii
Sp5g01490 Schrenkiella parvula
TAR375G0108 Trochodendron aralioides
THA.LOC104817387 Tarenaya hassleriana
Thecc.01G337000 Theobroma cacao
Thhalv10006166m.g Eutrema salsugineum
TPR.G4790 Trifolium pratense
TWI59G0463 Tripterygium wilfordii
unitig_22.g6820 Utricularia gibba
unitig_8.g3405 Utricularia gibba
vmacro12589 Vaccinium macrocarpon
VMungo0331G0918 Vigna mungo
VMungo0540G1103 Vigna mungo

User provided reference genes

Program Settings