Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p02130 Brassica napus
Aa31LG10G2420 Aethionema arabicum
Actinidia15782 Actinidia chinensis
Ah.01g020720 Amaranthus hybridus
AL1G60870 Arabidopsis lyrata
Aqoxy7G03710 Aquilegia oxysepala
AT1G52590 Arabidopsis thaliana
ATR0322G059 Amborella trichopoda
Atru.chr1.3007 Acer truncatum
AUR62011536 Chenopodium quinoa
AUR62016355 Chenopodium quinoa
BcaB04g17151 Brassica carinata
BcaC01g01330 Brassica carinata
BolC3t21390H Brassica oleracea
BraA08t32260Z Brassica rapa
C03p90690 Brassica napus
C05p43780 Brassica napus
CAN.G407.97 Capsicum annuum
CARHR042720 Cardamine hirsuta
Carub.0001s4159 Capsella rubella
Ca_01063_v3 Cicer arietinum L.
Cc04_g04220 Coffea canephora
CDE04G2501 Ceratophyllum demersum
CDE06G1467 Ceratophyllum demersum
Ciclev10026597m.g Citrus clementina
CiPaw.01G246000 Carya illinoinensis
ClCG07G012710 Citrullus lanatus
COL.COLO4_12927 Corchorus olitorius
Cpa.g.sc10.240 Carica papaya
Cre14.g622750 Chlamydomonas reinhardtii
CsaV3_4G001490 Cucumis sativus L.
CSS0009902 Camellia sinensis var. sinensis
CSS0049498 Camellia sinensis var. sinensis
DCAR_025501 Daucus carota
Dinv30585 Davidia involucrata
Duzib235G0045 Durio zibethinus
ECA234G2539 Erigeron canadensis
EL10Ac9g21916 Beta vulgaris
Eucgr.F02111 Eucalyptus grandis
Eucgr.F02534 Eucalyptus grandis
FAN02G3434 Fragaria x ananassa
FAN05G0483 Fragaria x ananassa
FAN09G3876 Fragaria x ananassa
FAN14G1255 Fragaria x ananassa
FvH4_6g30000 Fragaria vesca
Glyma.13G364600 Glycine max
Glyma.15G009100 Glycine max
Gohir.A06G186400 Gossypium hirsutum
Gohir.D06G192700 Gossypium hirsutum
Gorai.010G226500 Gossypium raimondii
GSVIVG01017300001 Vitis vinifera
HanXRQChr12g0361441 Helianthus annuus
Haze_16533 Corylus avellana
Hma1.2p1_0042F.1_g025470 Hydrangea macrophylla
HPP92_021817 Vanilla planifolia
Hund00536 Selenicereus undatus
Lalb_Chr22g0350921 Lupinus albus
Lj3g0011933 Lotus japonicus
Lj3g0020878 Lotus japonicus
Lj5C70G0 Lonicera japonica
Lsat_1_v5_gn_5_131321 Lactuca sativa
Manes.04G115000 Manihot esculenta
Mapoly0033s0027 Marchantia polymorpha
MBI01_g40020_MAGBIO Magnolia biondii
MBI01_g47382_MAGBIO Magnolia biondii
MBI14_g42957_MAGBIO Magnolia biondii
MCO09G691 Micromonas commoda
MCO16G483 Micromonas commoda
MD00G1022200 Malus domestica
Medtr2g103590 Medicago truncatula
MELO3C017890.2 Cucumis melo
Migut.I00787 Erythranthe guttata
MSTRG.11130 Avicennia marina
Nitab4.5_0001764g0020 Nicotiana tabacum
Nitab4.5_0010254g0040 Nicotiana tabacum
Nn8g39443 Nelumbo nucifera
Oeu052266.1 Olea europaea
Os01g0173000 Oryza sativa ssp. japonica
Peaxi162Scf00332g00758 Petunia axillaris
PGR102G3125 Punica granatum
PGSC0003DMG400000613 Solanum tuberosum
Phvul.005G176800 Phaseolus vulgaris
Potri.008G213200 Populus trichocarpa
Pp3c1_15690 Physcomitrium patens
PRCOL_00001525 Prasinoderma coloniale
PRCOL_00002946 Prasinoderma coloniale
Prupe.3G083500 Prunus persica
Psat5g301760 Pisum sativum
PSO017G2975 Papaver somniferum
PSO170G1412 Papaver somniferum
QL05p028345 Quercus lobata
RcHm_v2.0_Chr2g0136021 Rosa chinensis
Rhsim04G0187300 Rhododendron simsii
Rhsim08G0214800 Rhododendron simsii
Sabra08G0150000 Salix brachista
SalBow2G3434 Salvia bowleyana
Sc23g0006680 Simmondsia chinensis
Sed0005686 Sechium edule
SEGI_11602 Sequoiadendron giganteum
SEGI_23999 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02676 Striga asiatica
SMO266G0086 Selaginella moellendorffii
Solyc03g116570.3 Solanum lycopersicum
Sopen03g035480 Solanum pennellii
Sp1g39150 Schrenkiella parvula
TAR383G1031 Trochodendron aralioides
THA.LOC104818030 Tarenaya hassleriana
Thecc.06G069100 Theobroma cacao
Thhalv10011823m.g Eutrema salsugineum
TPR.G37207 Trifolium pratense
TPR.G39004 Trifolium pratense
TWI18G0931 Tripterygium wilfordii
unitig_52.g17452 Utricularia gibba
vmacro18979 Vaccinium macrocarpon
vmacro23010 Vaccinium macrocarpon
vmacro23011 Vaccinium macrocarpon
VMungo1080G1280 Vigna mungo
Zm00001eb108740 Zea mays
Zm00001eb122820 Zea mays
Zm00001eb319360 Zea mays
Zm00001eb421390 Zea mays

User provided reference genes

Program Settings