Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p21640 Brassica napus
Aa31LG9G7710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1665 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis
Actinidia18172 Actinidia chinensis
Ah.12g058350 Amaranthus hybridus
AL8G13490 Arabidopsis lyrata
Aqoxy3G01986 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea
AT5G45310 Arabidopsis thaliana
ATR0568G188 Amborella trichopoda
Atru.chr6.2146 Acer truncatum
AUR62010492 Chenopodium quinoa
AUR62017411 Chenopodium quinoa
BcaB07g30899 Brassica carinata
BcaC04g21786 Brassica carinata
BolC9t55627H Brassica oleracea
BraA09t37763Z Brassica rapa
C09p27640 Brassica napus
CANSAT35G0271 Cannabis sativa
CARHR176830 Cardamine hirsuta
Carub.0008s0284 Capsella rubella
Ca_25054_v3 Cicer arietinum L.
Cc08_g06080 Coffea canephora
CDE01G0342 Ceratophyllum demersum
Cfa012616 Carpinus fangiana
Ciclev10001580m.g Citrus clementina
CiPaw.11G070000 Carya illinoinensis
ClCG11G016190 Citrullus lanatus
COL.COLO4_16514 Corchorus olitorius
COL.COLO4_16736 Corchorus olitorius
Cpa.g.sc137.4 Carica papaya
CsaV3_4G014810 Cucumis sativus L.
CSS0018284 Camellia sinensis var. sinensis
DCAR_004540 Daucus carota
Dinv09413 Davidia involucrata
Dinv37439 Davidia involucrata
Duzib084G0833 Durio zibethinus
Duzib205G1329 Durio zibethinus
ECA246G4124 Erigeron canadensis
EL10Ac5g12595 Beta vulgaris
EL10Ac5g12596 Beta vulgaris
Eucgr.D02571 Eucalyptus grandis
FAN04G1190 Fragaria x ananassa
FAN08G1468 Fragaria x ananassa
FAN13G0980 Fragaria x ananassa
FAN18G2839 Fragaria x ananassa
FvH4_5g24810 Fragaria vesca
Glyma.01G152500 Glycine max
Glyma.09G217700 Glycine max
Gohir.A08G148300 Gossypium hirsutum
Gohir.D08G169400 Gossypium hirsutum
Gorai.004G176600 Gossypium raimondii
GSVIVG01036901001 Vitis vinifera
HanXRQChr04g0096591 Helianthus annuus
HanXRQChr06g0173221 Helianthus annuus
Haze_08039 Corylus avellana
Haze_08049 Corylus avellana
Hund14312 Selenicereus undatus
Hund28917 Selenicereus undatus
Hund28918 Selenicereus undatus
Lalb_Chr05g0215221 Lupinus albus
Lalb_Chr16g0380481 Lupinus albus
Lj2g0025157 Lotus japonicus
Lj8A366T23 Lonicera japonica
Lsat_1_v5_gn_3_19920 Lactuca sativa
Manes.15G190475 Manihot esculenta
Manes.17G002400 Manihot esculenta
MD06G1011900 Malus domestica
MD16G1286500 Malus domestica
MD16G1286600 Malus domestica
Medtr5g025800 Medicago truncatula
MELO3C000488.2 Cucumis melo
MELO3C010535.2 Cucumis melo
MELO3C027856.2 Cucumis melo
MELO3C035501.2 Cucumis melo
Migut.E01382 Erythranthe guttata
Nitab4.5_0000236g0060 Nicotiana tabacum
Nitab4.5_0000975g0010 Nicotiana tabacum
Nn1g09286 Nelumbo nucifera
Nn1g09329 Nelumbo nucifera
Oeu045949.2 Olea europaea
Os01g0962100 Oryza sativa ssp. japonica
Os04g0480050 Oryza sativa ssp. japonica
Peaxi162Scf00014g02116 Petunia axillaris
PGR031G2471 Punica granatum
PGSC0003DMG400020810 Solanum tuberosum
Phvul.002G123000 Phaseolus vulgaris
Potri.004G234300 Populus trichocarpa
Pp3c16_7350 Physcomitrium patens
Pp3c25_50 Physcomitrium patens
Prupe.5G014600 Prunus persica
Psat0s808g0080 Pisum sativum
PSO017G2194 Papaver somniferum
PSO170G1900 Papaver somniferum
QL12p003333 Quercus lobata
QL12p003340 Quercus lobata
RcHm_v2.0_Chr7g0215151 Rosa chinensis
Rhsim07G0140900 Rhododendron simsii
Sabra01G0179200 Salix brachista
SalBow1G1985 Salvia bowleyana
SalBow8G3333 Salvia bowleyana
Sc07g0008130 Simmondsia chinensis
Sed0000478 Sechium edule
Sed0005654 Sechium edule
SEGI_11154 Sequoiadendron giganteum
SGA_v2.0_scaffold121G33054 Striga asiatica
SHI32758 Sapria himalayana
Solyc08g075150.3 Solanum lycopersicum
Sopen08g023780 Solanum pennellii
Sp2g10250 Schrenkiella parvula
TAR629G0027 Trochodendron aralioides
THA.LOC104811203 Tarenaya hassleriana
Thecc.03G321400 Theobroma cacao
Thhalv10001132m.g Eutrema salsugineum
TPR.G7876 Trifolium pratense
TWI60G1390 Tripterygium wilfordii
VMungo1215G3049 Vigna mungo
Zm00001eb140380 Zea mays

User provided reference genes

Program Settings