Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25130 Brassica napus
Aa31LG5G2680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1999 Anthoceros agrestis
Actinidia21075 Actinidia chinensis
Actinidia24851 Actinidia chinensis
Ah.08g212660 Amaranthus hybridus
AL6G49760 Arabidopsis lyrata
Aqoxy5G00606 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea
AT4G03180 Arabidopsis thaliana
ATR0706G074 Amborella trichopoda
Atru.chr5.1237 Acer truncatum
Atru.chr5.1270 Acer truncatum
AUR62034630 Chenopodium quinoa
AUR62036645 Chenopodium quinoa
BcaB01g02511 Brassica carinata
BcaB05g23692 Brassica carinata
BcaC01g06702 Brassica carinata
BcaC01g06703 Brassica carinata
BcaC03g16213 Brassica carinata
BolC2t10017H Brassica oleracea
BolC3t16012H Brassica oleracea
BraA02t07501Z Brassica rapa
C02p39890 Brassica napus
C03p37140 Brassica napus
CAN.G1209.34 Capsicum annuum
CANSAT25G1401 Cannabis sativa
CARHR251610 Cardamine hirsuta
Carub.0006s3388 Capsella rubella
Ca_09115_v3 Cicer arietinum L.
Ca_23188_v3 Cicer arietinum L.
CBR_g54965 Chara braunii
Cc01_g20320 Coffea canephora
Cfa006024 Carpinus fangiana
Cfa006056 Carpinus fangiana
Ciclev10022357m.g Citrus clementina
CiPaw.08G099900 Carya illinoinensis
ClCG09G006430 Citrullus lanatus
COL.COLO4_08018 Corchorus olitorius
Cpa.g.sc9.172 Carica papaya
CsaV3_7G028720 Cucumis sativus L.
CSS0038517 Camellia sinensis var. sinensis
Dinv33000 Davidia involucrata
Duzib138G1186 Durio zibethinus
Duzib211G0091 Durio zibethinus
ECA247G1808 Erigeron canadensis
EL10Ac7g17390 Beta vulgaris
Eucgr.H01207 Eucalyptus grandis
FAN15G0256 Fragaria x ananassa
FAN20G2846 Fragaria x ananassa
FAN24G2031 Fragaria x ananassa
FAN27G1167 Fragaria x ananassa
FvH4_2g24850 Fragaria vesca
Glyma.03G209500 Glycine max
Glyma.19G206900 Glycine max
Gohir.A11G117500 Gossypium hirsutum
Gohir.D11G122400 Gossypium hirsutum
Gorai.007G131200 Gossypium raimondii
GSVIVG01010994001 Vitis vinifera
HanXRQChr15g0466141 Helianthus annuus
Haze_04795 Corylus avellana
Haze_04826 Corylus avellana
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla
HPP92_017865 Vanilla planifolia
Hund18083 Selenicereus undatus
Lalb_Chr18g0047451 Lupinus albus
Lj1g0015584 Lotus japonicus
Lsat_1_v5_gn_9_4841 Lactuca sativa
Manes.05G067500 Manihot esculenta
Mapoly0001s0215 Marchantia polymorpha
MBI19_g13630_MAGBIO Magnolia biondii
MD03G1276600 Malus domestica
MD11G1299100 Malus domestica
Medtr7g108100 Medicago truncatula
MELO3C015900.2 Cucumis melo
Migut.D00152 Erythranthe guttata
MSTRG.18188 Avicennia marina
Nitab4.5_0002093g0230 Nicotiana tabacum
Nitab4.5_0012299g0010 Nicotiana tabacum
Nn3g21320 Nelumbo nucifera
Oeu057561.4 Olea europaea
Os12g0538100 Oryza sativa ssp. japonica
Peaxi162Scf01039g00026 Petunia axillaris
PGR119G1443 Punica granatum
PGSC0003DMG400024043 Solanum tuberosum
Phvul.001G202800 Phaseolus vulgaris
Potri.014G134700 Populus trichocarpa
Pp3c9_10530 Physcomitrium patens
Prupe.8G253400 Prunus persica
Psat3g024440 Pisum sativum
PSO170G6580 Papaver somniferum
PSO210G2131 Papaver somniferum
QL12p024238 Quercus lobata
RcHm_v2.0_Chr6g0292701 Rosa chinensis
Rhsim13G0016600 Rhododendron simsii
Sabra14G0100400 Salix brachista
SalBow3G3170 Salvia bowleyana
Sc17g0003540 Simmondsia chinensis
Sed0008392 Sechium edule
Sed0009421 Sechium edule
SEGI_31360 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05756 Striga asiatica
SHI15557 Sapria himalayana
Solyc06g084500.3 Solanum lycopersicum
Sopen06g035880 Solanum pennellii
Sp6g03210 Schrenkiella parvula
TAR362G0318 Trochodendron aralioides
THA.LOC104801197 Tarenaya hassleriana
THA.LOC104827373 Tarenaya hassleriana
Thecc.01G291700 Theobroma cacao
Thhalv10028994m.g Eutrema salsugineum
TPR.G32314 Trifolium pratense
TWI12G0445 Tripterygium wilfordii
unitig_22.g5246 Utricularia gibba
vmacro02504 Vaccinium macrocarpon
VMungo1383G0445 Vigna mungo
Zm00001eb137700 Zea mays
Zm00001eb410530 Zea mays

User provided reference genes

Program Settings