Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18190 Brassica napus
Aa31LG5G4800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2950 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis
Actinidia02025 Actinidia chinensis
Actinidia02026 Actinidia chinensis
Actinidia14540 Actinidia chinensis
Ah.12g057360 Amaranthus hybridus
AL4G27880 Arabidopsis lyrata
Aqoxy7G00382 Aquilegia oxysepala
Aqoxy7G00383 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea
AT2G32500 Arabidopsis thaliana
ATR0680G238 Amborella trichopoda
Atru.chr6.3216 Acer truncatum
AUR62017243 Chenopodium quinoa
AUR62042944 Chenopodium quinoa
BcaB01g03976 Brassica carinata
BcaC01g05904 Brassica carinata
BolC3t14504H Brassica oleracea
BraA03t11079Z Brassica rapa
C03p21220 Brassica napus
CAN.G1231.36 Capsicum annuum
CAN.G26.17 Capsicum annuum
CARHR126330 Cardamine hirsuta
Carub.0004s1384 Capsella rubella
Carub.0004s3068 Capsella rubella
Ca_17553_v3 Cicer arietinum L.
CBR_g57728 Chara braunii
Cc08_g14300 Coffea canephora
CDE06G1437 Ceratophyllum demersum
Ciclev10016122m.g Citrus clementina
CiPaw.11G138400 Carya illinoinensis
ClCG07G007980 Citrullus lanatus
COL.COLO4_11251 Corchorus olitorius
Cpa.g.sc39.21 Carica papaya
CsaV3_4G006040 Cucumis sativus L.
CSS0023405 Camellia sinensis var. sinensis
DCAR_008412 Daucus carota
Dinv38979 Davidia involucrata
Duzib251G0852 Durio zibethinus
ECA233G3703 Erigeron canadensis
EL10Ac5g12764 Beta vulgaris
Eucgr.D01883 Eucalyptus grandis
FAN04G2914 Fragaria x ananassa
FAN08G3651 Fragaria x ananassa
FAN13G2116 Fragaria x ananassa
FAN18G0570 Fragaria x ananassa
FvH4_5g01880 Fragaria vesca
Glyma.05G087800 Glycine max
Glyma.05G205300 Glycine max
Glyma.08G012200 Glycine max
Gohir.A12G174300 Gossypium hirsutum
Gohir.D12G177000 Gossypium hirsutum
Gorai.008G189400 Gossypium raimondii
GSVIVG01019803001 Vitis vinifera
HanXRQChr12g0384501 Helianthus annuus
Haze_08904 Corylus avellana
Haze_08908 Corylus avellana
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla
HPP92_004974 Vanilla planifolia
Hund11496 Selenicereus undatus
Lalb_Chr05g0224971 Lupinus albus
Lj4g0017727 Lotus japonicus
Lj8A235T58 Lonicera japonica
Lsat_1_v5_gn_6_6941 Lactuca sativa
Lsat_1_v5_gn_8_1081 Lactuca sativa
Manes.12G073000 Manihot esculenta
Mapoly0086s0005 Marchantia polymorpha
Mapoly0086s0010 Marchantia polymorpha
Mapoly0152s0021 Marchantia polymorpha
MBI18_g01147_MAGBIO Magnolia biondii
MD06G1077000 Malus domestica
MD14G1098400 Malus domestica
Medtr8g096960 Medicago truncatula
MELO3C016345.2 Cucumis melo
Migut.A00797 Erythranthe guttata
MSTRG.12003 Avicennia marina
Nitab4.5_0000360g0080 Nicotiana tabacum
Nitab4.5_0010198g0030 Nicotiana tabacum
Nitab4.5_0029474g0010 Nicotiana tabacum
Nn6g33542 Nelumbo nucifera
Oeu025101.1 Olea europaea
Os03g0110900 Oryza sativa ssp. japonica
Peaxi162Scf01294g00327 Petunia axillaris
PGR031G1807 Punica granatum
PGSC0003DMG400004251 Solanum tuberosum
Phvul.002G287200 Phaseolus vulgaris
Potri.014G154900 Populus trichocarpa
Pp3c20_8200 Physcomitrium patens
Pp3c7_1410 Physcomitrium patens
Pp3c8_19270 Physcomitrium patens
Pp3s121_30 Physcomitrium patens
PRCOL_00003136 Prasinoderma coloniale
Prupe.5G095100 Prunus persica
Psat7g035840 Pisum sativum
PSO478G3588 Papaver somniferum
PSO782G1088 Papaver somniferum
QL12p017915 Quercus lobata
RcHm_v2.0_Chr7g0198641 Rosa chinensis
Sabra14G0117100 Salix brachista
SalBow6G1063 Salvia bowleyana
Sc22g0000340 Simmondsia chinensis
Sed0011813 Sechium edule
SEGI_22684 Sequoiadendron giganteum
SGA_v2.0_scaffold146G36248 Striga asiatica
SMO329G0076 Selaginella moellendorffii
Solyc12g056350.2 Solanum lycopersicum
Sopen12g028920 Solanum pennellii
Sp4g14850 Schrenkiella parvula
TAR375G0379 Trochodendron aralioides
THA.LOC104800995 Tarenaya hassleriana
Thecc.02G366400 Theobroma cacao
Thhalv10017053m.g Eutrema salsugineum
TPR.G12841 Trifolium pratense
TWI36G1290 Tripterygium wilfordii
VMungo0251G0775 Vigna mungo
Zm00001eb000830 Zea mays
Zm00001eb404120 Zea mays

User provided reference genes

Program Settings