Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p16820 Brassica napus
Aa31LG1G15650 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.106 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis
Actinidia12040 Actinidia chinensis
Actinidia36482 Actinidia chinensis
Ah.03g145470 Amaranthus hybridus
AL8G44220 Arabidopsis lyrata
Aqoxy5G01194 Aquilegia oxysepala
Aqoxy6G01271 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea
AT5G67140 Arabidopsis thaliana
ATR0800G077 Amborella trichopoda
Atru.chr3.288 Acer truncatum
Atru.chr3.300 Acer truncatum
AUR62001910 Chenopodium quinoa
AUR62003898 Chenopodium quinoa
BcaB02g09933 Brassica carinata
BolC7t42980H Brassica oleracea
BraA07t29407Z Brassica rapa
C07p24600 Brassica napus
CAN.G370.40 Capsicum annuum
CANSAT01G0297 Cannabis sativa
CARHR280510 Cardamine hirsuta
Carub.0008s2737 Capsella rubella
Cc07_g06140 Coffea canephora
CDE02G1946 Ceratophyllum demersum
CDE04G2757 Ceratophyllum demersum
Cfa004036 Carpinus fangiana
Ciclev10026421m.g Citrus clementina
CiPaw.01G016200 Carya illinoinensis
ClCG02G012310 Citrullus lanatus
ClCG02G012330 Citrullus lanatus
COL.COLO4_11446 Corchorus olitorius
Cpa.g.sc55.125 Carica papaya
CsaV3_2G016460 Cucumis sativus L.
CsaV3_2G016470 Cucumis sativus L.
CSS0005072 Camellia sinensis var. sinensis
CSS0020579 Camellia sinensis var. sinensis
DCAR_010880 Daucus carota
Duzib147G0216 Durio zibethinus
EL10Ac6g15726 Beta vulgaris
Eucgr.H01687 Eucalyptus grandis
FAN19G1431 Fragaria x ananassa
FAN23G1998 Fragaria x ananassa
FAN26G2627 Fragaria x ananassa
FAN28G0965 Fragaria x ananassa
FvH4_1g16240 Fragaria vesca
Glyma.01G187800 Glycine max
Glyma.11G054300 Glycine max
Gohir.A02G156700 Gossypium hirsutum
Gohir.A12G072600 Gossypium hirsutum
Gohir.D03G024000 Gossypium hirsutum
Gohir.D12G070500 Gossypium hirsutum
Gorai.003G025500 Gossypium raimondii
Gorai.008G077500 Gossypium raimondii
GSVIVG01022099001 Vitis vinifera
HanXRQChr09g0263661 Helianthus annuus
Haze_15377 Corylus avellana
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla
HPP92_026439 Vanilla planifolia
Hund16348 Selenicereus undatus
Lalb_Chr05g0213321 Lupinus albus
Lalb_Chr16g0378591 Lupinus albus
Lj2g0018871 Lotus japonicus
Lj4C151G8 Lonicera japonica
Lsat_1_v5_gn_4_164980 Lactuca sativa
Manes.12G104500 Manihot esculenta
Mapoly0005s0095 Marchantia polymorpha
MD02G1174700 Malus domestica
MD15G1285700 Malus domestica
Medtr5g016890 Medicago truncatula
Medtr5g016930 Medicago truncatula
MELO3C020856.2 Cucumis melo
MELO3C020857.2 Cucumis melo
Migut.H00418 Erythranthe guttata
MSTRG.2870 Avicennia marina
MSTRG.3434 Avicennia marina
Nitab4.5_0002694g0020 Nicotiana tabacum
Nitab4.5_0002765g0020 Nicotiana tabacum
Nn5g30349 Nelumbo nucifera
Oeu014828.1 Olea europaea
Oeu017456.1 Olea europaea
Oeu049899.1 Olea europaea
Os06g0166000 Oryza sativa ssp. japonica
Peaxi162Scf00549g00014 Petunia axillaris
PGSC0003DMG400004030 Solanum tuberosum
Phvul.002G017400 Phaseolus vulgaris
Phvul.008G146300 Phaseolus vulgaris
Potri.005G140000 Populus trichocarpa
Potri.007G045601 Populus trichocarpa
Pp3c7_15700 Physcomitrium patens
Prupe.7G131100 Prunus persica
Psat2g167840 Pisum sativum
PSO170G0414 Papaver somniferum
PSO210G0040 Papaver somniferum
QL06p040870 Quercus lobata
RcHm_v2.0_Chr2g0105951 Rosa chinensis
Rhsim10G0115300 Rhododendron simsii
Sabra05G0110900 Salix brachista
Sabra07G0040600 Salix brachista
Sc03g0001700 Simmondsia chinensis
Sed0009491 Sechium edule
SEGI_10636 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07326 Striga asiatica
SMO164G0246 Selaginella moellendorffii
Solyc02g093220.3 Solanum lycopersicum
Sopen02g037800 Solanum pennellii
Sp2g29550 Schrenkiella parvula
TAR381G0796 Trochodendron aralioides
TAR625G0931 Trochodendron aralioides
THA.LOC104821250 Tarenaya hassleriana
Thecc.01G059100 Theobroma cacao
Thhalv10004869m.g Eutrema salsugineum
TPR.G26907 Trifolium pratense
TWI09G1033 Tripterygium wilfordii
TWI73G1298 Tripterygium wilfordii
vmacro05309 Vaccinium macrocarpon
VMungo1215G1750 Vigna mungo
Zm00001eb375600 Zea mays

User provided reference genes

Program Settings