Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01130 Brassica napus
A10p26110 Brassica napus
Aa31LG3G15550 Aethionema arabicum
Actinidia13339 Actinidia chinensis
Ah.16g105840 Amaranthus hybridus
AL6G22350 Arabidopsis lyrata
Aqoxy7G01461 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WH0W9H Arachis hypogaea
AT5G11640 Arabidopsis thaliana
ATR0705G113 Amborella trichopoda
Atru.chr7.2079 Acer truncatum
AUR62009264 Chenopodium quinoa
AUR62042442 Chenopodium quinoa
BcaB08g37036 Brassica carinata
BcaC03g13384 Brassica carinata
BcaC04g19208 Brassica carinata
BcaNung02663 Brassica carinata
BolC2t06479H Brassica oleracea
BolC9t59347H Brassica oleracea
BraA02t05092Z Brassica rapa
BraA10t44672Z Brassica rapa
C02p05310 Brassica napus
C09p65180 Brassica napus
CAN.G208.62 Capsicum annuum
CANSAT25G3446 Cannabis sativa
CARHR201580 Cardamine hirsuta
Carub.0006s1012 Capsella rubella
Ca_03364_v3 Cicer arietinum L.
Cc08_g09720 Coffea canephora
CDE02G0347 Ceratophyllum demersum
Cfa013375 Carpinus fangiana
Ciclev10009282m.g Citrus clementina
CiPaw.07G203500 Carya illinoinensis
ClCG11G015120 Citrullus lanatus
COL.COLO4_20980 Corchorus olitorius
Cpa.g.sc78.16 Carica papaya
Cre10.g426400 Chlamydomonas reinhardtii
CsaV3_3G048520 Cucumis sativus L.
CSS0000910 Camellia sinensis var. sinensis
DCAR_000757 Daucus carota
Dinv27894 Davidia involucrata
Duzib168G0257 Durio zibethinus
ECA233G1748 Erigeron canadensis
EL10Ac2g04002 Beta vulgaris
Eucgr.C00603 Eucalyptus grandis
FAN15G1983 Fragaria x ananassa
FAN18G4502 Fragaria x ananassa
FAN20G1237 Fragaria x ananassa
FAN24G0356 Fragaria x ananassa
FAN24G1965 Fragaria x ananassa
FAN24G3337 Fragaria x ananassa
FAN27G2415 Fragaria x ananassa
FvH4_2g35350 Fragaria vesca
FvH4_5g31640 Fragaria vesca
Glyma.17G192700 Glycine max
Gohir.A05G046200 Gossypium hirsutum
Gohir.D05G047900 Gossypium hirsutum
Gorai.009G049200 Gossypium raimondii
GSVIVG01035613001 Vitis vinifera
HanXRQChr13g0402211 Helianthus annuus
HanXRQChr16g0519661 Helianthus annuus
Haze_21897 Corylus avellana
Haze_26101 Corylus avellana
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla
HPP92_021778 Vanilla planifolia
Hund03393 Selenicereus undatus
Lalb_Chr24g0402671 Lupinus albus
Lj1g0027455 Lotus japonicus
Lsat_1_v5_gn_5_12101 Lactuca sativa
Lsat_1_v5_gn_6_22680 Lactuca sativa
Manes.16G074700 Manihot esculenta
MBI04_g06585_MAGBIO Magnolia biondii
MCO04G352 Micromonas commoda
MD08G1113000 Malus domestica
MD15G1092400 Malus domestica
Medtr1g007120 Medicago truncatula
MELO3C003467.2 Cucumis melo
Migut.A00197 Erythranthe guttata
MSTRG.25911 Avicennia marina
Nitab4.5_0001309g0120 Nicotiana tabacum
Nitab4.5_0001737g0100 Nicotiana tabacum
Nn8g39112 Nelumbo nucifera
Os01g0200400 Oryza sativa ssp. japonica
Peaxi162Scf00064g01521 Petunia axillaris
PGR031G0123 Punica granatum
PGSC0003DMG400029395 Solanum tuberosum
Phvul.001G063300 Phaseolus vulgaris
Potri.006G237600 Populus trichocarpa
PRCOL_00006038 Prasinoderma coloniale
Prupe.1G447200 Prunus persica
Psat6g037080 Pisum sativum
PSO173G0006 Papaver somniferum
PSO824G0011 Papaver somniferum
QL09p008974 Quercus lobata
QL12p041270 Quercus lobata
RcHm_v2.0_Chr6g0306561 Rosa chinensis
Rhsim02G0176600 Rhododendron simsii
RhsimUnG0061900 Rhododendron simsii
Sabra06G0185800 Salix brachista
SalBow4G0386 Salvia bowleyana
Sc09g0009360 Simmondsia chinensis
Sed0023433 Sechium edule
SEGI_38144 Sequoiadendron giganteum
SEGI_39152 Sequoiadendron giganteum
SGA_v2.0_scaffold243G44286 Striga asiatica
SMO144G0045 Selaginella moellendorffii
Solyc12g095820.3 Solanum lycopersicum
Sopen12g031720 Solanum pennellii
Sp6g31980 Schrenkiella parvula
TAR626G1286 Trochodendron aralioides
THA.LOC104808485 Tarenaya hassleriana
Thecc.09G046100 Theobroma cacao
Thhalv10014470m.g Eutrema salsugineum
TPR.G24534 Trifolium pratense
TWI63G1544 Tripterygium wilfordii
unitig_93.g30708 Utricularia gibba
vmacro11054 Vaccinium macrocarpon
VMungo0647G0700 Vigna mungo
Zm00001eb337980 Zea mays

User provided reference genes

Program Settings