Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p36880 Brassica napus
Aa31LG1G20320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2116 Anthoceros agrestis
Actinidia11378 Actinidia chinensis
Actinidia39936 Actinidia chinensis
Ah.04g153810 Amaranthus hybridus
AL1G14230 Arabidopsis lyrata
Aqoxy2G03755 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea
AT1G04555 Arabidopsis thaliana
ATR0787G168 Amborella trichopoda
AUR62015239 Chenopodium quinoa
AUR62018035 Chenopodium quinoa
BcaB03g13488 Brassica carinata
BcaC07g36903 Brassica carinata
BcaNung06560 Brassica carinata
BolC5t29054H Brassica oleracea
BolC8t46922H Brassica oleracea
BolC8t46924H Brassica oleracea
BolC8t46925H Brassica oleracea
BolC8t46926H Brassica oleracea
BolC8t46928H Brassica oleracea
BraA10t42567Z Brassica rapa
CAN.G812.23 Capsicum annuum
CANSAT78G1588 Cannabis sativa
CARHR003900 Cardamine hirsuta
Carub.0001s0377 Capsella rubella
Ca_25848_v3 Cicer arietinum L.
Cc03_g06500 Coffea canephora
Cc03_g06520 Coffea canephora
CDE04G0122 Ceratophyllum demersum
Cfa014798 Carpinus fangiana
Cfa014800 Carpinus fangiana
Ciclev10006126m.g Citrus clementina
CiPaw.01G176600 Carya illinoinensis
ClCG06G007300 Citrullus lanatus
COL.COLO4_15990 Corchorus olitorius
Cpa.g.sc59.20 Carica papaya
CsaV3_2G012360 Cucumis sativus L.
CSS0001604 Camellia sinensis var. sinensis
Dinv27124 Davidia involucrata
Dinv29792 Davidia involucrata
Duzib151G0118 Durio zibethinus
Duzib212G0187 Durio zibethinus
ECA248G1661 Erigeron canadensis
EL10Ac3g06681 Beta vulgaris
Eucgr.H02902 Eucalyptus grandis
FAN12G4195 Fragaria x ananassa
FAN17G1046 Fragaria x ananassa
FAN22G1779 Fragaria x ananassa
FvH4_4g05040 Fragaria vesca
Glyma.20G082000 Glycine max
Gohir.A09G230800 Gossypium hirsutum
Gohir.D09G231900 Gossypium hirsutum
Gorai.006G254700 Gossypium raimondii
GSVIVG01027940001 Vitis vinifera
GSVIVG01027941001 Vitis vinifera
HanXRQChr01g0023081 Helianthus annuus
Haze_11482 Corylus avellana
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla
HPP92_020757 Vanilla planifolia
Hund22279 Selenicereus undatus
Lalb_Chr03g0036931 Lupinus albus
Lj6g0018890 Lotus japonicus
Lsat_1_v5_gn_1_75441 Lactuca sativa
Manes.03G157300 Manihot esculenta
Manes.15G046500 Manihot esculenta
MBI10_g39247_MAGBIO Magnolia biondii
MD13G1223900 Malus domestica
MD16G1228700 Malus domestica
Medtr1g045660 Medicago truncatula
MELO3C023048.2 Cucumis melo
Migut.G00559 Erythranthe guttata
MSTRG.9849 Avicennia marina
Nitab4.5_0001041g0010 Nicotiana tabacum
Nitab4.5_0001041g0050 Nicotiana tabacum
Nitab4.5_0005154g0030 Nicotiana tabacum
Nn1g02998 Nelumbo nucifera
Oeu059390.1 Olea europaea
Os02g0816700 Oryza sativa ssp. japonica
Peaxi162Scf00531g00210 Petunia axillaris
PGR004G2303 Punica granatum
PGSC0003DMG400001502 Solanum tuberosum
Phvul.007G231900 Phaseolus vulgaris
Potri.008G173000 Populus trichocarpa
Potri.010G064500 Populus trichocarpa
Prupe.1G050700 Prunus persica
Psat6g018400 Pisum sativum
PSO210G0805 Papaver somniferum
PSO210G7184 Papaver somniferum
QL06p021600 Quercus lobata
QL06p021608 Quercus lobata
RcHm_v2.0_Chr4g0395941 Rosa chinensis
Rhsim02G0047700 Rhododendron simsii
Sabra08G0132100 Salix brachista
Sabra10G0042500 Salix brachista
Sabra16G0316500 Salix brachista
SalBow2G0496 Salvia bowleyana
Sc25g0004840 Simmondsia chinensis
Sed0025873 Sechium edule
SGA_v2.0_scaffold147G36268 Striga asiatica
Solyc09g090820.4 Solanum lycopersicum
Sopen09g033770 Solanum pennellii
Sp1g03390 Schrenkiella parvula
TAR633G2131 Trochodendron aralioides
THA.LOC104816009 Tarenaya hassleriana
Thecc.04G267600 Theobroma cacao
Thhalv10009014m.g Eutrema salsugineum
TPR.G23967 Trifolium pratense
TWI09G1292 Tripterygium wilfordii
TWI73G0993 Tripterygium wilfordii
unitig_32.g11693 Utricularia gibba
vmacro15486 Vaccinium macrocarpon
VMungo0720G0308 Vigna mungo
Zm00001eb191430 Zea mays

User provided reference genes

Program Settings