Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p45280 Brassica napus
Aa31LG10G7330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis
Actinidia31106 Actinidia chinensis
Actinidia31107 Actinidia chinensis
Ah.06g186680 Amaranthus hybridus
AL5G32810 Arabidopsis lyrata
Aqoxy2G01116 Aquilegia oxysepala
Aqoxy2G01117 Aquilegia oxysepala
Aqoxy2G01120 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea
AT3G52220 Arabidopsis thaliana
ATR0776G086 Amborella trichopoda
Atru.chr12.1047 Acer truncatum
AUR62041519 Chenopodium quinoa
AUR62042084 Chenopodium quinoa
BcaC02g09271 Brassica carinata
BcaC07g39592 Brassica carinata
BolC8t50363H Brassica oleracea
BraA04t16410Z Brassica rapa
BraA09t39991Z Brassica rapa
C04p40730 Brassica napus
C08p27460 Brassica napus
CAN.G1417.5 Capsicum annuum
CARHR161980 Cardamine hirsuta
Carub.0005s1858 Capsella rubella
Ca_04833_v3 Cicer arietinum L.
Cc02_g09570 Coffea canephora
CDE04G0959 Ceratophyllum demersum
Cfa010329 Carpinus fangiana
Cfa024623 Carpinus fangiana
Ciclev10016593m.g Citrus clementina
CiPaw.13G041000 Carya illinoinensis
CiPaw.14G033700 Carya illinoinensis
ClCG08G008320 Citrullus lanatus
COL.COLO4_03655 Corchorus olitorius
Cre18.g749347 Chlamydomonas reinhardtii
CsaV3_6G004290 Cucumis sativus L.
CSS0000414 Camellia sinensis var. sinensis
DCAR_006335 Daucus carota
Dinv12840 Davidia involucrata
Duzib114G0052 Durio zibethinus
ECA232G0968 Erigeron canadensis
EL10Ac7g17292 Beta vulgaris
EL10Ac8g19171 Beta vulgaris
Eucgr.J00269 Eucalyptus grandis
FAN15G0841 Fragaria x ananassa
FAN20G1775 Fragaria x ananassa
FAN24G1745 Fragaria x ananassa
FvH4_2g10940 Fragaria vesca
Glyma.01G052400 Glycine max
Glyma.02G110700 Glycine max
Gohir.A05G287400 Gossypium hirsutum
Gohir.D05G288500 Gossypium hirsutum
Gorai.009G303600 Gossypium raimondii
GSVIVG01010682001 Vitis vinifera
HanXRQChr11g0321661 Helianthus annuus
Haze_03300 Corylus avellana
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla
HPP92_000012 Vanilla planifolia
Hund22273 Selenicereus undatus
Lalb_Chr10g0098441 Lupinus albus
Lj2g0012177 Lotus japonicus
Lj3A925T73 Lonicera japonica
Lsat_1_v5_gn_0_8161 Lactuca sativa
Lsat_1_v5_gn_4_8660 Lactuca sativa
Manes.10G062700 Manihot esculenta
Mapoly0044s0087 Marchantia polymorpha
MBI17_g13115_MAGBIO Magnolia biondii
MCO05G050 Micromonas commoda
MD06G1038200 Malus domestica
Medtr5g042160 Medicago truncatula
MELO3C019900.2 Cucumis melo
Migut.F00866 Erythranthe guttata
MSTRG.9054 Avicennia marina
Nitab4.5_0002586g0010 Nicotiana tabacum
Nitab4.5_0009484g0010 Nicotiana tabacum
Nn6g34864 Nelumbo nucifera
Oeu026608.1 Olea europaea
Oeu030223.2 Olea europaea
Os08g0558700 Oryza sativa ssp. japonica
Peaxi162Scf00125g00234 Petunia axillaris
PGR044G2546 Punica granatum
PGSC0003DMG400023966 Solanum tuberosum
Phvul.002G091600 Phaseolus vulgaris
Potri.008G019100 Populus trichocarpa
Potri.010G240300 Populus trichocarpa
Pp3c1_22490 Physcomitrium patens
Prupe.5G030400 Prunus persica
Psat2g116120 Pisum sativum
PSO339G2358 Papaver somniferum
PSO692G0001 Papaver somniferum
PSO801G0555 Papaver somniferum
QL04p046797 Quercus lobata
QL04p047245 Quercus lobata
RcHm_v2.0_Chr2g0160691 Rosa chinensis
RcHm_v2.0_Chr6g0269151 Rosa chinensis
Rhsim09G0141800 Rhododendron simsii
Sabra08G0012500 Salix brachista
Sabra10G0188100 Salix brachista
SalBow3G0796 Salvia bowleyana
Sc09g0005300 Simmondsia chinensis
Sed0022988 Sechium edule
SEGI_26123 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21313 Striga asiatica
SMO367G0990 Selaginella moellendorffii
Solyc11g006760.3 Solanum lycopersicum
Sopen11g002690 Solanum pennellii
Sp5g10040 Schrenkiella parvula
TAR633G2162 Trochodendron aralioides
THA.LOC104823558 Tarenaya hassleriana
Thecc.10G114200 Theobroma cacao
Thhalv10010678m.g Eutrema salsugineum
TPR.G31604 Trifolium pratense
TPR.G39994 Trifolium pratense
TWI38G1517 Tripterygium wilfordii
TWI63G1188 Tripterygium wilfordii
unitig_899.g14469 Utricularia gibba
vmacro10311 Vaccinium macrocarpon
Zm00001eb039400 Zea mays

User provided reference genes

Program Settings