Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26620 Brassica napus
A05p10810 Brassica napus
Aa31sc409G10 Aethionema arabicum
AL4G30870 Arabidopsis lyrata
Aqoxy2G00094 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SSSL8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZL64GD Arachis hypogaea
AT2G34860 Arabidopsis thaliana
ATR1149G131 Amborella trichopoda
Atru.chr3.2190 Acer truncatum
AUR62000037 Chenopodium quinoa
AUR62019207 Chenopodium quinoa
BcaB01g02723 Brassica carinata
BcaB01g03109 Brassica carinata
BcaB06g28828 Brassica carinata
BcaB06g29011 Brassica carinata
BcaC02g07751 Brassica carinata
BcaC02g11570 Brassica carinata
BcaC07g42181 Brassica carinata
BolC4t22980H Brassica oleracea
BolC4t27880H Brassica oleracea
BraA04t18167Z Brassica rapa
BraA05t20025Z Brassica rapa
C04p13910 Brassica napus
C04p64040 Brassica napus
CAN.G140.24 Capsicum annuum
CANSAT11G0726 Cannabis sativa
CARHR129020 Cardamine hirsuta
Carub.0004s1654 Capsella rubella
CBR_g22940 Chara braunii
Cc01_g00990 Coffea canephora
CDE04G0274 Ceratophyllum demersum
Cfa009626 Carpinus fangiana
Ciclev10016858m.g Citrus clementina
CiPaw.13G171400 Carya illinoinensis
ClCG02G023820 Citrullus lanatus
COL.COLO4_10447 Corchorus olitorius
Cpa.g.sc119.91 Carica papaya
Cre11.g475850 Chlamydomonas reinhardtii
CsaV3_4G023550 Cucumis sativus L.
CSS0011176 Camellia sinensis var. sinensis
Dinv13419 Davidia involucrata
Dinv34743 Davidia involucrata
Duzib168G0997 Durio zibethinus
ECA248G3199 Erigeron canadensis
EL10Ac4g10339 Beta vulgaris
Eucgr.B03632 Eucalyptus grandis
FAN21G2764 Fragaria x ananassa
FvH4_3g44571 Fragaria vesca
FvH4_3g44681 Fragaria vesca
Glyma.10G293900 Glycine max
Glyma.20G243800 Glycine max
Gohir.A08G079300 Gossypium hirsutum
Gohir.A11G206900 Gossypium hirsutum
Gohir.D08G088800 Gossypium hirsutum
Gohir.D11G216800 Gossypium hirsutum
Gorai.004G093500 Gossypium raimondii
Gorai.007G232900 Gossypium raimondii
GSVIVG01025384001 Vitis vinifera
HanXRQChr11g0344931 Helianthus annuus
Haze_22995 Corylus avellana
HPP92_016182 Vanilla planifolia
HPP92_026734 Vanilla planifolia
Hund06674 Selenicereus undatus
Lalb_Chr02g0143771 Lupinus albus
Lj2A705G49 Lonicera japonica
Lj2A706G26 Lonicera japonica
Lj5g0010961 Lotus japonicus
Lsat_1_v5_gn_1_68280 Lactuca sativa
Manes.03G089200 Manihot esculenta
Mapoly0120s0023 Marchantia polymorpha
MCO03G122 Micromonas commoda
MD03G1011600 Malus domestica
MD11G1014500 Malus domestica
Medtr1g116170 Medicago truncatula
MELO3C014661.2 Cucumis melo
Migut.F01376 Erythranthe guttata
MSTRG.208 Avicennia marina
MSTRG.8324 Avicennia marina
Nitab4.5_0001620g0030 Nicotiana tabacum
Nitab4.5_0005477g0080 Nicotiana tabacum
Nn7g35969 Nelumbo nucifera
Oeu038858.2 Olea europaea
Os08g0463900 Oryza sativa ssp. japonica
Peaxi162Scf00441g00213 Petunia axillaris
PGR102G3301 Punica granatum
PGSC0003DMG401032143 Solanum tuberosum
Phvul.007G006200 Phaseolus vulgaris
Potri.001G009800 Populus trichocarpa
Pp3c3_12490 Physcomitrium patens
Pp3c4_29200 Physcomitrium patens
PRCOL_00006415 Prasinoderma coloniale
Prupe.6G012000 Prunus persica
Psat6g238960 Pisum sativum
PSO339G5391 Papaver somniferum
PSO384G3168 Papaver somniferum
QL01p010258 Quercus lobata
QL01p010272 Quercus lobata
QL08p062509 Quercus lobata
RcHm_v2.0_Chr5g0081351 Rosa chinensis
Sabra01G0007800 Salix brachista
SalBow6G7140 Salvia bowleyana
Sc16g0012000 Simmondsia chinensis
Sed0019652 Sechium edule
SEGI_11759 Sequoiadendron giganteum
SGA_v2.0_scaffold78G25462 Striga asiatica
SMO331G0037 Selaginella moellendorffii
Solyc01g006130.4 Solanum lycopersicum
Sopen01g002130 Solanum pennellii
Sp4g17140 Schrenkiella parvula
TAR636G1600 Trochodendron aralioides
THA.LOC104815114 Tarenaya hassleriana
Thecc.09G215500 Theobroma cacao
Thhalv10011829m.g Eutrema salsugineum
Thhalv10012349m.g Eutrema salsugineum
Thhalv10017283m.g Eutrema salsugineum
TPR.G10430 Trifolium pratense
TWI34G0416 Tripterygium wilfordii
unitig_747.g21415 Utricularia gibba
vmacro04249 Vaccinium macrocarpon
VMungo0720G3035 Vigna mungo

User provided reference genes

Program Settings