Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20700 Brassica napus
A10p09870 Brassica napus
Aa31LG3G8560 Aethionema arabicum
Actinidia32874 Actinidia chinensis
Ah.13g068460 Amaranthus hybridus
AL1G10170 Arabidopsis lyrata
AL8G26560 Arabidopsis lyrata
Aqoxy7G00398 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0F3SR2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea
AT5G52180 Arabidopsis thaliana
ATR0757G038 Amborella trichopoda
Atru.chr1.484 Acer truncatum
AUR62016008 Chenopodium quinoa
AUR62021215 Chenopodium quinoa
BcaB08g35566 Brassica carinata
BcaC04g20605 Brassica carinata
BolC9t57044H Brassica oleracea
BraA10t43068Z Brassica rapa
C09p41600 Brassica napus
CAN.G856.1 Capsicum annuum
CARHR265100 Cardamine hirsuta
Carub.0008s1227 Capsella rubella
Ca_10784_v3 Cicer arietinum L.
Cc02_g03190 Coffea canephora
CDE11G0822 Ceratophyllum demersum
Cfa008301 Carpinus fangiana
Ciclev10004900m.g Citrus clementina
CiPaw.03G104400 Carya illinoinensis
ClCG05G007930 Citrullus lanatus
COL.COLO4_14285 Corchorus olitorius
CsaV3_3G016960 Cucumis sativus L.
CSS0002088 Camellia sinensis var. sinensis
CSS0024482 Camellia sinensis var. sinensis
DCAR_009355 Daucus carota
Dinv28461 Davidia involucrata
Duzib068G0509 Durio zibethinus
Duzib205G1849 Durio zibethinus
EL10Ac3g05712 Beta vulgaris
Eucgr.K00239 Eucalyptus grandis
FAN01G0792 Fragaria x ananassa
FAN03G3172 Fragaria x ananassa
FAN06G0009 Fragaria x ananassa
FAN06G4553 Fragaria x ananassa
FAN10G1161 Fragaria x ananassa
FvH4_7g29210 Fragaria vesca
Glyma.10G237700 Glycine max
Glyma.20G156900 Glycine max
Gohir.A08G100500 Gossypium hirsutum
Gohir.A12G259700 Gossypium hirsutum
Gohir.D08G112040 Gossypium hirsutum
Gohir.D12G260500 Gossypium hirsutum
Gorai.004G119800 Gossypium raimondii
Gorai.008G279100 Gossypium raimondii
GSVIVG01010594001 Vitis vinifera
HanXRQChr09g0253731 Helianthus annuus
Haze_13736 Corylus avellana
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla
Lalb_Chr06g0161051 Lupinus albus
Lj1E995T0 Lonicera japonica
Lj1P995T25 Lonicera japonica
LjContig00238g0014067 Lotus japonicus
Lsat_1_v5_gn_0_29900 Lactuca sativa
Manes.06G145800 Manihot esculenta
Manes.14G027600 Manihot esculenta
Mapoly0061s0021 Marchantia polymorpha
MBI12_g14429_MAGBIO Magnolia biondii
MCO13G538 Micromonas commoda
MD01G1198800 Malus domestica
MD07G1266600 Malus domestica
Medtr1g100767 Medicago truncatula
MELO3C006892.2 Cucumis melo
Migut.F01134 Erythranthe guttata
MSTRG.8446 Avicennia marina
Nitab4.5_0000716g0260 Nicotiana tabacum
Nitab4.5_0001508g0080 Nicotiana tabacum
Oeu022583.1 Olea europaea
Os06g0129000 Oryza sativa ssp. japonica
Peaxi162Scf00915g00007 Petunia axillaris
PGR142G0281 Punica granatum
PGSC0003DMG400014324 Solanum tuberosum
Phvul.007G067900 Phaseolus vulgaris
Potri.015G140900 Populus trichocarpa
Pp3c14_16850 Physcomitrium patens
Prupe.2G292200 Prunus persica
Psat6g200680 Pisum sativum
PSO478G3258 Papaver somniferum
PSO782G0556 Papaver somniferum
QL09p014600 Quercus lobata
RcHm_v2.0_Chr1g0376971 Rosa chinensis
Rhsim03G0179000 Rhododendron simsii
Sabra15G0151500 Salix brachista
SalBow2G3298 Salvia bowleyana
Sc19g0001600 Simmondsia chinensis
Sed0005391 Sechium edule
SEGI_30493 Sequoiadendron giganteum
SGA_v2.0_scaffold113G31757 Striga asiatica
SMO116G0206 Selaginella moellendorffii
SMO195G0056 Selaginella moellendorffii
Solyc03g026010.3 Solanum lycopersicum
Sopen03g004840 Solanum pennellii
Sp6g14430 Schrenkiella parvula
TAR374G1009 Trochodendron aralioides
THA.LOC104825095 Tarenaya hassleriana
Thecc.03G173100 Theobroma cacao
Thhalv10013484m.g Eutrema salsugineum
TPR.G14337 Trifolium pratense
TWI23G0502 Tripterygium wilfordii
unitig_0.g462 Utricularia gibba
unitig_0.g463 Utricularia gibba
vmacro06700 Vaccinium macrocarpon
VMungo0251G3058 Vigna mungo
VMungo0331G1316 Vigna mungo
VMungo0331G1728 Vigna mungo
VMungo1215G0888 Vigna mungo
VMungo1215G2423 Vigna mungo
Zm00001eb378500 Zea mays

User provided reference genes

Program Settings