Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p20380 Brassica napus
Aa31LG11G10390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis
Actinidia23494 Actinidia chinensis
Actinidia40165 Actinidia chinensis
Ah.13g074000 Amaranthus hybridus
AL6G30780 Arabidopsis lyrata
Aqoxy2G03328 Aquilegia oxysepala
Aqoxy2G03329 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea
AT5G19300 Arabidopsis thaliana
ATR0626G244 Amborella trichopoda
Atru.chr4.2522 Acer truncatum
AUR62038173 Chenopodium quinoa
AUR62043415 Chenopodium quinoa
BcaB08g36587 Brassica carinata
BcaC04g18580 Brassica carinata
BolC9t58560H Brassica oleracea
BraA10t44108Z Brassica rapa
C09p56970 Brassica napus
CAN.G69.11 Capsicum annuum
CANSAT78G1956 Cannabis sativa
CARHR193670 Cardamine hirsuta
Carub.0006s1763 Capsella rubella
Ca_10966_v3 Cicer arietinum L.
Cc03_g03390 Coffea canephora
CDE05G0907 Ceratophyllum demersum
Cfa015608 Carpinus fangiana
Cfa024389 Carpinus fangiana
Ciclev10005176m.g Citrus clementina
CiPaw.02G094600 Carya illinoinensis
ClCG05G005300 Citrullus lanatus
COL.COLO4_06205 Corchorus olitorius
COL.COLO4_30034 Corchorus olitorius
Cpa.g.sc147.29 Carica papaya
Cre16.g670617 Chlamydomonas reinhardtii
CsaV3_3G013530 Cucumis sativus L.
CSS0008441 Camellia sinensis var. sinensis
DCAR_002398 Daucus carota
Dinv38415 Davidia involucrata
Dinv44504 Davidia involucrata
Duzib151G0305 Durio zibethinus
ECA236G2554 Erigeron canadensis
EL10As3g23313 Beta vulgaris
Eucgr.H03560 Eucalyptus grandis
FAN07G2036 Fragaria x ananassa
FAN12G2172 Fragaria x ananassa
FvH4_4g14960 Fragaria vesca
Glyma.10G250600 Glycine max
Glyma.20G143100 Glycine max
Gohir.A01G023600 Gossypium hirsutum
Gohir.D01G021600 Gossypium hirsutum
Gorai.002G024100 Gossypium raimondii
Gorai.004G106600 Gossypium raimondii
Gorai.012G092500 Gossypium raimondii
GSVIVG01017920001 Vitis vinifera
HanXRQChr13g0400281 Helianthus annuus
Haze_00934 Corylus avellana
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla
HPP92_010726 Vanilla planifolia
Lalb_Chr02g0144651 Lupinus albus
Lalb_Chr02g0144661 Lupinus albus
Lalb_Chr06g0164781 Lupinus albus
Lj3A741G38 Lonicera japonica
Lj5g0006939 Lotus japonicus
Lsat_1_v5_gn_9_31900 Lactuca sativa
Lsat_1_v5_gn_9_80941 Lactuca sativa
Manes.03G181700 Manihot esculenta
Mapoly0049s0075 Marchantia polymorpha
MBI17_g12493_MAGBIO Magnolia biondii
MD13G1186800 Malus domestica
MD16G1187700 Malus domestica
Medtr1g105065 Medicago truncatula
MELO3C006549.2 Cucumis melo
Migut.N00169 Erythranthe guttata
MSTRG.24750 Avicennia marina
Nitab4.5_0000144g0120 Nicotiana tabacum
Nitab4.5_0000180g0030 Nicotiana tabacum
Oeu040660.1 Olea europaea
Os04g0244500 Oryza sativa ssp. japonica
Peaxi162Scf01336g00122 Petunia axillaris
PGR004G2885 Punica granatum
PGSC0003DMG400008999 Solanum tuberosum
Phvul.007G053900 Phaseolus vulgaris
Potri.008G149800 Populus trichocarpa
Potri.010G091400 Populus trichocarpa
Pp3c7_20660 Physcomitrium patens
PRCOL_00002662 Prasinoderma coloniale
Prupe.1G154500 Prunus persica
Psat6g209880 Pisum sativum
PSO170G4636 Papaver somniferum
PSO302G0285 Papaver somniferum
QL06p003531 Quercus lobata
QL06p003535 Quercus lobata
RcHm_v2.0_Chr4g0417131 Rosa chinensis
Rhsim04G0204300 Rhododendron simsii
Sabra08G0113900 Salix brachista
Sabra10G0051900 Salix brachista
SalBow5G0644 Salvia bowleyana
SalBow5G2730 Salvia bowleyana
Sc19g0004360 Simmondsia chinensis
Sed0010167 Sechium edule
SEGI_15408 Sequoiadendron giganteum
SEGI_20820 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05110 Striga asiatica
SMO364G0578 Selaginella moellendorffii
Solyc01g079710.3 Solanum lycopersicum
Sopen01g031480 Solanum pennellii
Sp6g25120 Schrenkiella parvula
TAR362G0294 Trochodendron aralioides
TAR362G0446 Trochodendron aralioides
TAR633G1367 Trochodendron aralioides
THA.LOC104818820 Tarenaya hassleriana
Thecc.04G226500 Theobroma cacao
Thhalv10013731m.g Eutrema salsugineum
TPR.G5533 Trifolium pratense
TWI73G1280 Tripterygium wilfordii
unitig_899.g15640 Utricularia gibba
VMungo0720G0184 Vigna mungo
Zm00001eb373340 Zea mays

User provided reference genes

Program Settings