Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p64570 Brassica napus
Aa31LG1G4120 Aethionema arabicum
Actinidia08143 Actinidia chinensis
Actinidia27800 Actinidia chinensis
Ah.03g133160 Amaranthus hybridus
AL1G21590 Arabidopsis lyrata
Aqoxy5G03808 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea
AT1G10710 Arabidopsis thaliana
ATR1154G026 Amborella trichopoda
ATR1154G038 Amborella trichopoda
Atru.chr11.2118 Acer truncatum
Atru.chr11.2134 Acer truncatum
AUR62005444 Chenopodium quinoa
AUR62024297 Chenopodium quinoa
BcaB08g37368 Brassica carinata
BcaC07g41800 Brassica carinata
BolC8t52400H Brassica oleracea
BraA09t41832Z Brassica rapa
C08p48610 Brassica napus
CANSAT01G1755 Cannabis sativa
CARHR010890 Cardamine hirsuta
Carub.0001s1022 Capsella rubella
Ca_22577_v3 Cicer arietinum L.
Cc04_g11830 Coffea canephora
Cc11_g15560 Coffea canephora
CDE06G0796 Ceratophyllum demersum
Cfa009198 Carpinus fangiana
Ciclev10033875m.g Citrus clementina
CiPaw.05G183700 Carya illinoinensis
CiPaw.13G137800 Carya illinoinensis
ClCG08G017740 Citrullus lanatus
COL.COLO4_24245 Corchorus olitorius
COL.COLO4_30156 Corchorus olitorius
Cpa.g.sc33.3 Carica papaya
CSS0026295 Camellia sinensis var. sinensis
DCAR_005656 Daucus carota
DCAR_031138 Daucus carota
Dinv20613 Davidia involucrata
Dinv24805 Davidia involucrata
Duzib248G0505 Durio zibethinus
EL10Ac5g10683 Beta vulgaris
EL10Ac6g13783 Beta vulgaris
FAN07G1571 Fragaria x ananassa
FAN12G1097 Fragaria x ananassa
FAN12G1379 Fragaria x ananassa
FAN17G2552 Fragaria x ananassa
FAN22G0568 Fragaria x ananassa
FvH4_4g25900 Fragaria vesca
Glyma.08G283200 Glycine max
Glyma.08G283250 Glycine max
Glyma.18G143200 Glycine max
Gohir.A03G136500 Gossypium hirsutum
Gohir.D02G159700 Gossypium hirsutum
Gorai.005G179800 Gossypium raimondii
GSVIVG01004087001 Vitis vinifera
GSVIVG01007676001 Vitis vinifera
HanXRQChr17g0539731 Helianthus annuus
Haze_12236 Corylus avellana
HPP92_008331 Vanilla planifolia
HPP92_008333 Vanilla planifolia
Lalb_Chr16g0392221 Lupinus albus
Lalb_Chr16g0392231 Lupinus albus
Lj4g0008721 Lotus japonicus
Lj6C811T17 Lonicera japonica
Lsat_1_v5_gn_3_28841 Lactuca sativa
Manes.13G025900 Manihot esculenta
MBI10_g00733_MAGBIO Magnolia biondii
MBI14_g06666_MAGBIO Magnolia biondii
MBI14_g06710_MAGBIO Magnolia biondii
MBI16_g23844_MAGBIO Magnolia biondii
MD13G1097800 Malus domestica
MD13G1097900 Malus domestica
Medtr2g079800 Medicago truncatula
Medtr8g069560 Medicago truncatula
Migut.E00193 Erythranthe guttata
Nitab4.5_0002255g0100 Nicotiana tabacum
Nitab4.5_0002552g0050 Nicotiana tabacum
Nn1g00170 Nelumbo nucifera
Nn3g16750 Nelumbo nucifera
Nn3g18224 Nelumbo nucifera
Oeu049180.1 Olea europaea
Oeu056719.1 Olea europaea
Peaxi162Scf00128g00033 Petunia axillaris
PGR119G1584 Punica granatum
PGSC0003DMG400018608 Solanum tuberosum
Phvul.003G063800 Phaseolus vulgaris
Potri.010G044800 Populus trichocarpa
Prupe.1G247500 Prunus persica
Prupe.1G247600 Prunus persica
Psat1g023160 Pisum sativum
PSO063G0496 Papaver somniferum
PSO832G2940 Papaver somniferum
QL03p058556 Quercus lobata
RcHm_v2.0_Chr4g0433351 Rosa chinensis
Rhsim12G0041300 Rhododendron simsii
SalBow8G1297 Salvia bowleyana
SalBow8G2270 Salvia bowleyana
Sc04g0009420 Simmondsia chinensis
Sed0016045 Sechium edule
SEGI_25539 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13586 Striga asiatica
SGA_v2.0_scaffold63G21726 Striga asiatica
SGA_v2.0_scaffold779G53588 Striga asiatica
SGA_v2.0_scaffold87G27084 Striga asiatica
SHI17754 Sapria himalayana
SHI17755 Sapria himalayana
Solyc05g013360.3 Solanum lycopersicum
Sopen05g008150 Solanum pennellii
Sp1g09410 Schrenkiella parvula
TAR371G0523 Trochodendron aralioides
TAR629G0056 Trochodendron aralioides
THA.LOC104823651 Tarenaya hassleriana
Thecc.02G257200 Theobroma cacao
Thecc.03G022200 Theobroma cacao
Thhalv10007956m.g Eutrema salsugineum
TPR.G34666 Trifolium pratense
TWI36G0027 Tripterygium wilfordii
TWI75G0333 Tripterygium wilfordii
VMungo0251G2192 Vigna mungo
Zm00001eb382430 Zea mays

User provided reference genes

Program Settings