Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p36540 Brassica napus
Aa31LG11G5020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1186 Anthoceros agrestis
Actinidia01191 Actinidia chinensis
AL6G38030 Arabidopsis lyrata
Aqoxy7G01236 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3J87F1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8SEXI Arachis hypogaea
AT5G26040 Arabidopsis thaliana
ATR0716G011 Amborella trichopoda
ATR0716G054 Amborella trichopoda
Atru.chr7.1052 Acer truncatum
AUR62009158 Chenopodium quinoa
AUR62009159 Chenopodium quinoa
AUR62022066 Chenopodium quinoa
AUR62022067 Chenopodium quinoa
BolC7t44725H Brassica oleracea
BraA06t26580Z Brassica rapa
C07p41940 Brassica napus
CAN.G181.69 Capsicum annuum
CANSAT25G1083 Cannabis sativa
CARHR187290 Cardamine hirsuta
Carub.0006s2380 Capsella rubella
Ca_13172_v3 Cicer arietinum L.
CBR_g50289 Chara braunii
CBR_g71830 Chara braunii
Cc08_g10530 Coffea canephora
CDE05G0889 Ceratophyllum demersum
Cfa017949 Carpinus fangiana
Ciclev10008784m.g Citrus clementina
CiPaw.15G039500 Carya illinoinensis
ClCG05G017800 Citrullus lanatus
COL.COLO4_21049 Corchorus olitorius
Cpa.g.sc7.166 Carica papaya
Cre03.g158200 Chlamydomonas reinhardtii
Cre08.g358555 Chlamydomonas reinhardtii
CsaV3_4G035570 Cucumis sativus L.
CSS0009868 Camellia sinensis var. sinensis
CSS0020610 Camellia sinensis var. sinensis
DCAR_004431 Daucus carota
Dinv27980 Davidia involucrata
Duzib150G0622 Durio zibethinus
Duzib168G0725 Durio zibethinus
EL10Ac2g03896 Beta vulgaris
Eucgr.C00641 Eucalyptus grandis
FAN20G0896 Fragaria x ananassa
FAN27G2179 Fragaria x ananassa
FvH4_2g32010 Fragaria vesca
Glyma.17G229600 Glycine max
Gohir.A13G187100 Gossypium hirsutum
Gohir.D13G193900 Gossypium hirsutum
Gorai.013G220000 Gossypium raimondii
GSVIVG01035364001 Vitis vinifera
HanXRQChr17g0538441 Helianthus annuus
Haze_18198 Corylus avellana
Hma1.2p1_0482F.1_g162540 Hydrangea macrophylla
Hma1.2p1_0482F.1_g162550 Hydrangea macrophylla
HPP92_026784 Vanilla planifolia
Hund19462 Selenicereus undatus
Lalb_Chr14g0367721 Lupinus albus
Lj5g0009338 Lotus japonicus
Lj8A542T15 Lonicera japonica
Lj8A542T16 Lonicera japonica
Lj8A547G7 Lonicera japonica
Lsat_1_v5_gn_3_24361 Lactuca sativa
Manes.03G047600 Manihot esculenta
Mapoly0007s0200 Marchantia polymorpha
MBI01_g09962_MAGBIO Magnolia biondii
MD08G1043300 Malus domestica
Medtr1g016440 Medicago truncatula
MELO3C016865.2 Cucumis melo
Migut.A00139 Erythranthe guttata
MSTRG.11661 Avicennia marina
Nitab4.5_0001584g0100 Nicotiana tabacum
Nitab4.5_0004456g0010 Nicotiana tabacum
Oeu029409.1 Olea europaea
Os06g0571100 Oryza sativa ssp. japonica
Peaxi162Scf00477g00010 Petunia axillaris
PGR031G2613 Punica granatum
PGSC0003DMG400029944 Solanum tuberosum
Phvul.001G034500 Phaseolus vulgaris
Potri.006G230300 Populus trichocarpa
Pp3c16_3940 Physcomitrium patens
Pp3c6_24640 Physcomitrium patens
PRCOL_00005844 Prasinoderma coloniale
Prupe.1G413100 Prunus persica
Psat6g020800 Pisum sativum
PSO063G1048 Papaver somniferum
PSO782G5661 Papaver somniferum
PSO832G1739 Papaver somniferum
QL02p001321 Quercus lobata
RcHm_v2.0_Chr2g0140831 Rosa chinensis
RcHm_v2.0_Chr4g0398391 Rosa chinensis
RcHm_v2.0_Chr4g0419371 Rosa chinensis
RcHm_v2.0_Chr5g0028711 Rosa chinensis
RcHm_v2.0_Chr5g0034671 Rosa chinensis
RcHm_v2.0_Chr5g0034681 Rosa chinensis
RcHm_v2.0_Chr6g0269961 Rosa chinensis
RcHm_v2.0_Chr6g0269981 Rosa chinensis
RcHm_v2.0_Chr6g0310741 Rosa chinensis
Rhsim11G0044500 Rhododendron simsii
Sabra06G0178400 Salix brachista
SalBow4G2021 Salvia bowleyana
Sc23g0004490 Simmondsia chinensis
Sed0000821 Sechium edule
SEGI_11187 Sequoiadendron giganteum
SEGI_31029 Sequoiadendron giganteum
SGA_v2.0_scaffold88G27225 Striga asiatica
SMO228G0123 Selaginella moellendorffii
SMO325G0002 Selaginella moellendorffii
Solyc08g065350.4 Solanum lycopersicum
Solyc12g040530.1 Solanum lycopersicum
Sopen08g018910 Solanum pennellii
Sp2g21680 Schrenkiella parvula
THA.LOC104811245 Tarenaya hassleriana
Thecc.09G053100 Theobroma cacao
Thhalv10004371m.g Eutrema salsugineum
TPR.G13096 Trifolium pratense
unitig_748.g7524 Utricularia gibba
vmacro00145 Vaccinium macrocarpon
VMungo0647G2476 Vigna mungo
Zm00001eb385130 Zea mays

User provided reference genes

Program Settings