Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11160 Brassica napus
Aa31LG6G1900 Aethionema arabicum
Actinidia32789 Actinidia chinensis
Ah.09g232390 Amaranthus hybridus
AL7G34890 Arabidopsis lyrata
Aqoxy7G00896 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea
AT4G19190 Arabidopsis thaliana
ATR0568G043 Amborella trichopoda
Atru.chr8.2629 Acer truncatum
AUR62030109 Chenopodium quinoa
AUR62042461 Chenopodium quinoa
BcaB08g35318 Brassica carinata
BcaC09g51429 Brassica carinata
BcaC09g51430 Brassica carinata
BolC1t01294H Brassica oleracea
BraA01t01062Z Brassica rapa
C01p13200 Brassica napus
CAN.G1026.7 Capsicum annuum
CANSAT35G0698 Cannabis sativa
CARHR123800 Cardamine hirsuta
CARHR226070 Cardamine hirsuta
Carub.0007s2195 Capsella rubella
Ca_13135_v3 Cicer arietinum L.
CBR_g50314 Chara braunii
Cc08_g05650 Coffea canephora
CDE01G0285 Ceratophyllum demersum
CDE12G0431 Ceratophyllum demersum
Ciclev10011516m.g Citrus clementina
CiPaw.11G075200 Carya illinoinensis
ClCG11G016060 Citrullus lanatus
COL.COLO4_11282 Corchorus olitorius
Cpa.g.sc90.36 Carica papaya
Cre06.g280700 Chlamydomonas reinhardtii
CsaV3_4G027910 Cucumis sativus L.
CSS0014058 Camellia sinensis var. sinensis
DCAR_030906 Daucus carota
Dinv41806 Davidia involucrata
ECA233G0973 Erigeron canadensis
EL10Ac8g19602 Beta vulgaris
Eucgr.D02560 Eucalyptus grandis
FAN20G0322 Fragaria x ananassa
FAN21G2282 Fragaria x ananassa
FAN21G2299 Fragaria x ananassa
FAN21G2462 Fragaria x ananassa
FAN21G2626 Fragaria x ananassa
FAN27G1697 Fragaria x ananassa
FvH4_2g37380 Fragaria vesca
FvH4_3g03932 Fragaria vesca
Glyma.01G154300 Glycine max
Glyma.11G090300 Glycine max
Gohir.A08G149500 Gossypium hirsutum
Gohir.D08G170500 Gossypium hirsutum
Gorai.004G178000 Gossypium raimondii
GSVIVG01036870001 Vitis vinifera
HanXRQChr07g0198411 Helianthus annuus
HanXRQChr07g0198421 Helianthus annuus
Haze_08434 Corylus avellana
HPP92_002488 Vanilla planifolia
Hund17692 Selenicereus undatus
Hund17694 Selenicereus undatus
Lalb_Chr16g0380351 Lupinus albus
Lj2g0006155 Lotus japonicus
Lj3A28G25 Lonicera japonica
Lj3A8G25 Lonicera japonica
Lj3A8T28 Lonicera japonica
Lj3C28T3 Lonicera japonica
Lj9P453T24 Lonicera japonica
Lsat_1_v5_gn_6_17281 Lactuca sativa
Manes.17G000100 Manihot esculenta
Mapoly0190s0006 Marchantia polymorpha
MCO15G109 Micromonas commoda
MD08G1001400 Malus domestica
MD15G1000700 Malus domestica
Medtr2g040240 Medicago truncatula
Medtr2g040410 Medicago truncatula
MELO3C010522.2 Cucumis melo
Migut.E01373 Erythranthe guttata
MSTRG.1757 Avicennia marina
Nitab4.5_0000030g0480 Nicotiana tabacum
Nitab4.5_0007095g0010 Nicotiana tabacum
Nn7g37388 Nelumbo nucifera
Oeu015543.2 Olea europaea
Oeu046783.1 Olea europaea
Os06g0708900 Oryza sativa ssp. japonica
Peaxi162Scf00193g00730 Petunia axillaris
PGR042G0863 Punica granatum
Phvul.002G121300 Phaseolus vulgaris
Potri.004G236300 Populus trichocarpa
Pp3c3_31660 Physcomitrium patens
Prupe.1G353400 Prunus persica
Psat1g131640 Pisum sativum
PSO502G0007 Papaver somniferum
PSO675G5955 Papaver somniferum
QL12p004173 Quercus lobata
RcHm_v2.0_Chr6g0304321 Rosa chinensis
Rhsim11G0036700 Rhododendron simsii
Sabra01G0180600 Salix brachista
Sc24g0001520 Simmondsia chinensis
Sed0006082 Sechium edule
SEGI_36653 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35886 Striga asiatica
SMO172G0042 Selaginella moellendorffii
Solyc08g075420.4 Solanum lycopersicum
Sopen08g024050 Solanum pennellii
Sp7g17900 Schrenkiella parvula
TAR629G1131 Trochodendron aralioides
THA.LOC104806196 Tarenaya hassleriana
Thecc.03G318900 Theobroma cacao
Thhalv10024821m.g Eutrema salsugineum
TPR.G13376 Trifolium pratense
TPR.G29075 Trifolium pratense
TPR.G30154 Trifolium pratense
TWI73G0063 Tripterygium wilfordii
unitig_37.g12910 Utricularia gibba
vmacro00091 Vaccinium macrocarpon
VMungo0251G3731 Vigna mungo
VMungo1215G3406 Vigna mungo
Zm00001eb227500 Zea mays
Zm00001eb339160 Zea mays
Zm00001eb395460 Zea mays

User provided reference genes

Program Settings