Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p54790 Brassica napus
Aa31LG6G7050 Aethionema arabicum
Actinidia04204 Actinidia chinensis
Actinidia27580 Actinidia chinensis
Ah.12g052520 Amaranthus hybridus
AL7G29520 Arabidopsis lyrata
Aqoxy5G04214 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea
AT4G23840 Arabidopsis thaliana
ATR0188G004 Amborella trichopoda
Atru.BG.201.p Acer truncatum
AUR62010836 Chenopodium quinoa
AUR62019834 Chenopodium quinoa
BcaNung04088 Brassica carinata
BcaNung04237 Brassica carinata
BcaNung04238 Brassica carinata
BolC7t45811H Brassica oleracea
BraA03t14546Z Brassica rapa
C07p53150 Brassica napus
CAN.G532.118 Capsicum annuum
CANSAT21G1897 Cannabis sativa
CARHR231220 Cardamine hirsuta
Carub.0007s1729 Capsella rubella
Ca_17483_v3 Cicer arietinum L.
Ca_17508_v3 Cicer arietinum L.
CBR_g39933 Chara braunii
Cc08_g16020 Coffea canephora
CDE03G0094 Ceratophyllum demersum
Cfa021209 Carpinus fangiana
Ciclev10019283m.g Citrus clementina
CiPaw.12G083500 Carya illinoinensis
ClCG07G015010 Citrullus lanatus
COL.COLO4_10694 Corchorus olitorius
Cpa.g.sc79.39 Carica papaya
Cre12.g535400 Chlamydomonas reinhardtii
CsaV3_4G006550 Cucumis sativus L.
CSS0002826 Camellia sinensis var. sinensis
DCAR_029886 Daucus carota
Dinv37534 Davidia involucrata
Dinv37535 Davidia involucrata
Dinv38835 Davidia involucrata
Duzib068G0791 Durio zibethinus
Duzib205G1524 Durio zibethinus
ECA233G0093 Erigeron canadensis
EL10Ac5g12911 Beta vulgaris
Eucgr.E00859 Eucalyptus grandis
FAN04G0113 Fragaria x ananassa
FAN08G2039 Fragaria x ananassa
FAN13G1782 Fragaria x ananassa
FAN18G3438 Fragaria x ananassa
FAN18G4203 Fragaria x ananassa
FvH4_5g04510 Fragaria vesca
Glyma.05G216500 Glycine max
Gohir.A02G101400 Gossypium hirsutum
Gohir.D03G082800 Gossypium hirsutum
Gorai.003G080600 Gossypium raimondii
GSVIVG01019526001 Vitis vinifera
HanXRQChr02g0047891 Helianthus annuus
HanXRQChr09g0272151 Helianthus annuus
Haze_08618 Corylus avellana
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla
HPP92_024023 Vanilla planifolia
Hund11391 Selenicereus undatus
Lalb_Chr05g0224161 Lupinus albus
Lj4g0027687 Lotus japonicus
Lj8C208G13 Lonicera japonica
Lsat_1_v5_gn_6_12380 Lactuca sativa
Manes.02G010400 Manihot esculenta
MBI06_g08449_MAGBIO Magnolia biondii
MD14G1128100 Malus domestica
Medtr0050s0150 Medicago truncatula
Medtr8g099415 Medicago truncatula
MELO3C016288.2 Cucumis melo
Migut.A00646 Erythranthe guttata
MSTRG.25670 Avicennia marina
Nitab4.5_0001231g0070 Nicotiana tabacum
Nitab4.5_0005537g0050 Nicotiana tabacum
Nn3g19021 Nelumbo nucifera
Oeu031670.2 Olea europaea
Os05g0212200 Oryza sativa ssp. japonica
Peaxi162Scf00074g00932 Petunia axillaris
PGR042G1206 Punica granatum
PGSC0003DMG400012287 Solanum tuberosum
Phvul.002G297700 Phaseolus vulgaris
Potri.001G092000 Populus trichocarpa
Pp3c22_12260 Physcomitrium patens
Prupe.2G005400 Prunus persica
Prupe.5G118200 Prunus persica
Psat7g026640 Pisum sativum
PSO384G1203 Papaver somniferum
QL12p023582 Quercus lobata
QL93p2003_0058 Quercus lobata
RcHm_v2.0_Chr7g0194941 Rosa chinensis
Rhsim02G0242800 Rhododendron simsii
Sabra01G0068400 Salix brachista
SalBow1G0494 Salvia bowleyana
Sc22g0005020 Simmondsia chinensis
Sed0014568 Sechium edule
SEGI_00989 Sequoiadendron giganteum
SGA_v2.0_scaffold96G28963 Striga asiatica
SHI08936 Sapria himalayana
SMO232G0056 Selaginella moellendorffii
Solyc08g082270.3 Solanum lycopersicum
Sopen08g030540 Solanum pennellii
Sp7g21790 Schrenkiella parvula
TAR376G0673 Trochodendron aralioides
TAR629G2735 Trochodendron aralioides
TAR629G3536 Trochodendron aralioides
TAR636G1103 Trochodendron aralioides
THA.LOC104815028 Tarenaya hassleriana
Thecc.03G297200 Theobroma cacao
Thhalv10024706m.g Eutrema salsugineum
TPR.G3379 Trifolium pratense
TWI60G0540 Tripterygium wilfordii
unitig_748.g8129 Utricularia gibba
unitig_748.g8130 Utricularia gibba
vmacro11428 Vaccinium macrocarpon
VMungo0251G1431 Vigna mungo
Zm00001eb350650 Zea mays

User provided reference genes

Program Settings